RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CTXN1P60606 82 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 RPL27P61353 136 aaKnown RBP13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 PIGFQ07326 219 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 TOP3AQ13472 1001 aaPredicted RBP13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 DGCR6Q14129 220 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 TMEM53Q6P2H8 277 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 SYT14Q8NB59 555 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 MOSPD2Q8NHP6 518 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 ASB10Q8WXI3 467 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 MUC13Q9H3R2 512 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 NDUFAF4Q9P032 175 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 CD300AQ9UGN4 299 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 CSMD2Q7Z408 3487 aa13.73□□□□□ -0.21
TSPAN4-201ENST00000346501 ITPR3Q14573 2671 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 XKRYO14609 159 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 TRMUO75648 421 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 GADD45GO95257 159 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 FABP3P05413 133 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 IFNGR2P38484 337 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 PTDSS1P48651 473 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 SNRPD2P62316 118 aaKnown RBP13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 RAB1AP62820 205 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 GALK2Q01415 458 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 PLP2Q04941 152 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 SLC36A2Q495M3 483 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 NRN1LQ496H8 165 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 ZBED5Q49AG3 693 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 MTX3Q5HYI7 312 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 TMPRSS11FQ6ZWK6 438 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 BIVMQ86UB2 503 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 SLC22A24Q8N4F4 322 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 MCHR2Q969V1 340 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 ZNF347Q96SE7 839 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 CACNG6Q9BXT2 260 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 C1orf198Q9H425 327 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 SMURF2Q9HAU4 748 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 CA10Q9NS85 328 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 TMEM38BQ9NVV0 291 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 GRHPRQ9UBQ7 328 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 TMCC3Q9ULS5 477 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 ALPK2Q86TB3 2170 aa13.72□□□□□ -0.21
TSPAN4-201ENST00000346501 USF3Q68DE3 2245 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 TRAV27A0A087WT01 109 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 PDE5AO76074 875 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 ERCC1P07992 297 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 INHBBP09529 407 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 TSPAN19P0C672 248 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 NPR2P20594 1047 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 MAKP20794 623 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 MSX2P35548 267 aaPredicted RBP13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 ACVR1BP36896 505 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 SERPINF1P36955 418 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 GPR4P46093 362 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 NUDT6P53370 316 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 MYBPC1Q00872 1141 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 SPIBQ01892 262 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 FXNQ16595 210 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 CLEC12BQ2HXU8 276 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 THEM4Q5T1C6 240 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 PODNL1Q6PEZ8 512 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 LRFN4Q6PJG9 635 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 VHLLQ6RSH7 139 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 B3GLCTQ6Y288 498 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 SLC16A14Q7RTX9 510 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 RBM15BQ8NDT2 890 aaKnown RBP13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 SLC7A13Q8TCU3 470 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 BCAS4Q8TDM0 211 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 FBXO17Q96EF6 278 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 C7orf34Q96L11 122 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 TNFRSF13CQ96RJ3 184 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 ALG12Q9BV10 488 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 LRMDAQ9H2I8 198 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 ACTR3BQ9P1U1 418 aa13.71□□□□□ -0.21
TSPAN4-201ENST00000346501 IQCMA0A1B0GVH7 501 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 B9A039 149 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 PRSS23O95084 383 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 NDUFB2O95178 105 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 CD8AP01732 235 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 GIPRP48546 466 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 RPS23P62266 143 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 VLDLRP98155 873 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 DAG1Q14118 895 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 HIST3H3Q16695 136 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 ARMC4Q5T2S8 1044 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 TBPL2Q6SJ96 375 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 NUP37Q8NFH4 326 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 OR4K5Q8NGD3 323 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 OR1J2Q8NGS2 313 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 OR13C2Q8NGS9 318 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 OR52J3Q8NH60 311 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 FAM46AQ96IP4 442 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 LRGUKQ96M69 825 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 MRPL13Q9BYD1 178 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 CCNB1IP1Q9NPC3 277 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 B3GNT2Q9NY97 397 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 ZNF346Q9UL40 294 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 PRPF19Q9UMS4 504 aaKnown RBP13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 FKBP7Q9Y680 259 aa13.7□□□□□ -0.22
TSPAN4-201ENST00000346501 PLCE1Q9P212 2302 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms