RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 OTOL1A6NHN0 477 aaPredicted RBP16.08■□□□□ 0.17
SPAST-202ENST00000345662 OR6C76A6NM76 312 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 P2RY10O00398 339 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 DCTN6O00399 190 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 DFFBO76075 338 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 RD3LP0DJH9 198 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 FCGR2AP12318 317 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 ACHEP22303 614 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 SELENOVP59797 346 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 ZNF385BQ569K4 471 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 SYS1Q8N2H4 156 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 DEFB119Q8N690 84 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 IL1F10Q8WWZ1 152 aa16.08■□□□□ 0.17
SPAST-202ENST00000345662 TRAV20A0A0B4J274 112 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 PRR35P0CG20 571 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 SLC7A9P82251 487 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 ST6GAL2Q96JF0 529 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 VSTM5A8MXK1 200 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 OR4E1P0C645 316 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 TMEM164Q5U3C3 297 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 UQCC3Q6UW78 93 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 Q6ZRG5 221 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 PAPOLGQ9BWT3 736 aaKnown RBP16.08■□□□□ 0.16
SPAST-202ENST00000345662 CYSLTR2Q9NS75 346 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 ASPDHA6ND91 283 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 HLA-HP01893 362 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 BAMBIQ13145 260 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 SFRP5Q5T4F7 317 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 SYT9Q86SS6 491 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 PRSS35Q8N3Z0 413 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 EPHX3Q9H6B9 360 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 GNG13Q9P2W3 67 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 CGGBP1Q9UFW8 167 aaPredicted RBP16.08■□□□□ 0.16
SPAST-202ENST00000345662 PCDHGA1Q9Y5H4 931 aa16.08■□□□□ 0.16
SPAST-202ENST00000345662 NME2P1O60361 137 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 CPN1P15169 458 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 NFYBP25208 207 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 ZNF750Q32MQ0 723 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 SPNS2Q8IVW8 549 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 KIAA1958Q8N8K9 716 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 OR8D4Q8NGM9 314 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 OR5M8Q8NGP6 311 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 OR2G3Q8NGZ4 309 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 FGGYQ96C11 551 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 SMIM19Q96E16 107 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 PTDSS2Q9BVG9 487 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 CBY1Q9Y3M2 126 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 A0A0B4J203 849 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 MSR1P21757 451 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 PLCXD3Q63HM9 321 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 WDR5BQ86VZ2 330 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 BAGE3Q86Y29 109 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 BAGE2Q86Y30 109 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 MKXQ8IYA7 352 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 SFT2D1Q8WV19 159 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 WDR89Q96FK6 387 aaPredicted RBP16.07■□□□□ 0.16
SPAST-202ENST00000345662 VN1R3Q9BXE9 311 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.07■□□□□ 0.16
SPAST-202ENST00000345662 CEBPZOSA8MTT3 80 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 BCL2L11O43521 198 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 ATPAF1Q5TC12 328 aaPredicted RBP16.07■□□□□ 0.16
SPAST-202ENST00000345662 MCATQ8IVS2 390 aaKnown RBP16.07■□□□□ 0.16
SPAST-202ENST00000345662 LGI3Q8N145 548 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 B4GALT7Q9UBV7 327 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 GFYI3L273 518 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 P2RY2P41231 377 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 MTCP1P56278 107 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 OGFOD3Q6PK18 319 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 PLXDC1Q8IUK5 500 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 TSSK2Q96PF2 358 aa16.07■□□□□ 0.16
SPAST-202ENST00000345662 TMEM235A6NFC5 223 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 ZNF587BE7ETH6 402 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 DDAH2O95865 285 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 CFIP05156 583 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 HPNP05981 417 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 PDLIM3Q53GG5 364 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 ABHD17CQ6PCB6 329 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 LILRA3Q8N6C8 439 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 TMEM217Q8N7C4 229 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 OR13C5Q8NGS8 318 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 Q96M85 177 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 SEMA4CQ9C0C4 833 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 OR52A1Q9UKL2 312 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 MDFIC2A0A1B0GVS7 189 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 PHF1O43189 567 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 LILRB3O75022 631 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 H2AFB1P0C5Y9 115 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 RABIFP47224 123 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 OR13C8Q8NGS7 320 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 ADAM19Q9H013 955 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 PPP5D1E7EU14 171 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 OR7C1O76099 320 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 FGF9P31371 208 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 DCTDP32321 178 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 TSFMP43897 325 aaKnown RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 OR1D4P47884 311 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 DHPSP49366 369 aaPredicted RBP16.06■□□□□ 0.16
SPAST-202ENST00000345662 RAB38P57729 211 aa16.06■□□□□ 0.16
SPAST-202ENST00000345662 MELKQ14680 651 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms