RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FGF20Q9NP95 211 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 STRAPQ9Y3F4 350 aaKnown RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 ASPDHA6ND91 283 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 OR6C68A6NDL8 312 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 PHF1O43189 567 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 WBP2NLQ6ICG8 309 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 FAM71E1Q6IPT2 247 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 FAM199XQ6PEV8 388 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF620Q6ZNG0 422 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 SLC22A24Q8N4F4 322 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 PAPOLGQ9BWT3 736 aaKnown RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 TM7SF3Q9NS93 570 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 CDK2AP1O14519 115 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 TCAPO15273 167 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 CA12O43570 354 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 TK1P04183 234 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 IL5P05113 134 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 P2RX1P51575 399 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 GSG1Q2KHT4 349 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 FAM209BQ5JX69 171 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 FAM160A2Q8N612 972 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 OR4C16Q8NGL9 310 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 PFN4Q8NHR9 129 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 GLIPR2Q9H4G4 154 aa11.16□□□□□ -0.62
COL12A1-202ENST00000345356 GDF2Q9UK05 429 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-202ENST00000345356 GPR31O00270 319 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 IL33O95760 270 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 RPL12P30050 165 aaKnown RBP11.15□□□□□ -0.62
COL12A1-202ENST00000345356 HBG1P69891 147 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 HBG2P69892 147 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 DLX2Q07687 328 aaPredicted RBP11.15□□□□□ -0.62
COL12A1-202ENST00000345356 PRR22Q8IZ63 422 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ZNF740Q8NDX6 193 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 DUSP18Q8NEJ0 188 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 TANKQ92844 425 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 NPAS1Q99742 590 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 MED9Q9NWA0 146 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 H3BML4 177 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 WNT1P04628 370 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ARHGAP19Q14CB8 494 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 OR51A4Q8NGJ6 313 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 IL1F10Q8WWZ1 152 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 RBM24Q9BX46 236 aaKnown RBP11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ADAM29Q9UKF5 820 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 EMC9Q9Y3B6 208 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 SLC5A10A0PJK1 596 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ARRDC5A6NEK1 342 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 YY2O15391 372 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ADH1BP00325 375 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 DBHP09172 617 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 HLA-DOBP13765 273 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 CPMP14384 443 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 PFN3P60673 137 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ELAVL3Q14576 367 aaKnown RBP11.15□□□□□ -0.62
COL12A1-202ENST00000345356 MEP1BQ16820 701 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 C11orf87Q6NUJ2 197 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 SMIM15Q7Z3B0 74 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 CBLN2Q8IUK8 224 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 VRK3Q8IV63 474 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 FAM71CQ8NEG0 241 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 TM4SF18Q96CE8 201 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 AMDHD1Q96NU7 426 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 ZFYVE21Q9BQ24 234 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 MMP26Q9NRE1 261 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 RYDENQ9NUL5 291 aaKnown RBP11.15□□□□□ -0.62
COL12A1-202ENST00000345356 PRLHRP49683 370 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 RPS21P63220 83 aaKnown RBP11.15□□□□□ -0.62
COL12A1-202ENST00000345356 MOGAT2Q3SYC2 334 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 TMEM31Q5JXX7 168 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 OR1S2Q8NGQ3 325 aa11.15□□□□□ -0.62
COL12A1-202ENST00000345356 A0A1W2PP55 124 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 P2RY10O00398 339 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 PDGFBP01127 241 aaPredicted RBP11.15□□□□□ -0.63
COL12A1-202ENST00000345356 EPXP11678 715 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 RTP2Q5QGT7 225 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 PHYHD1Q5SRE7 291 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 DPY19L2P2Q6ZN68 376 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 FAM24BQ8N5W8 94 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 LILRB1Q8NHL6 650 aaPredicted RBP11.15□□□□□ -0.63
COL12A1-202ENST00000345356 PDXPQ96GD0 296 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 BCO1Q9HAY6 547 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 LHX3Q9UBR4 397 aa11.15□□□□□ -0.63
COL12A1-202ENST00000345356 A0A1B0GWA3 101 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 NXPH3O95157 252 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SOD2P04179 222 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SRPXP78539 464 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 RASD2Q96D21 266 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 DEFB118Q96PH6 123 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 UHRF2Q96PU4 802 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PLK3Q9H4B4 646 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SERTAD3Q9UJW9 196 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PCDHGA1Q9Y5H4 931 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 OR52A4PA6NMU1 304 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 PRKRAO75569 313 aaKnown RBP11.14□□□□□ -0.63
COL12A1-202ENST00000345356 SFTPDP35247 375 aa11.14□□□□□ -0.63
COL12A1-202ENST00000345356 FKBP1BP68106 108 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms