RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 GOSR1O95249 250 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ZNF23P17027 643 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 CDH2P19022 906 aaPredicted RBP10.42□□□□□ -0.74
SNCA-202ENST00000345009 SDHAP31040 664 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ZNF84P51523 738 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 IST1P53990 364 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 CD47Q08722 323 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 FHL1Q13642 323 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 MELKQ14680 651 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 TIMM23BQ5SRD1 257 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 THEM4Q5T1C6 240 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ARMC4Q5T2S8 1044 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ANKRD16Q6P6B7 361 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ZNF620Q6ZNG0 422 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ADCK1Q86TW2 530 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 IGFN1Q86VF2 1251 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 LRRC75AQ8NAA5 344 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 LINC01560Q8TB33 94 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 LRTOMTQ8WZ04 291 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 S100PBPQ96BU1 408 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ZNF570Q96NI8 536 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 MUS81Q96NY9 551 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 ERMAPQ96PL5 475 aaPredicted RBP10.42□□□□□ -0.74
SNCA-202ENST00000345009 ALKBH3Q96Q83 286 aaPredicted RBP10.42□□□□□ -0.74
SNCA-202ENST00000345009 GPA33Q99795 319 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 SMURF2Q9HAU4 748 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 GPR35Q9HC97 309 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 S100A14Q9HCY8 104 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 OBP2BQ9NPH6 170 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 VNN3Q9NY84 501 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 IL20Q9NYY1 176 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 IER3IP1Q9Y5U9 82 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 MAGED1Q9Y5V3 778 aaPredicted RBP10.42□□□□□ -0.74
SNCA-202ENST00000345009 ABCA4P78363 2273 aa10.42□□□□□ -0.74
SNCA-202ENST00000345009 OR5H1A6NKK0 313 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 ZNF99A8MXY4 864 aaPredicted RBP10.41□□□□□ -0.74
SNCA-202ENST00000345009 H3BN98 237 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 PDLIM1O00151 329 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 ARPC3O15145 178 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 TRMUO75648 421 aaKnown RBP10.41□□□□□ -0.74
SNCA-202ENST00000345009 RAD51DO75771 328 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 FARS2O95363 451 aaKnown RBP10.41□□□□□ -0.74
SNCA-202ENST00000345009 WNT11O96014 354 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 QDPRP09417 244 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 PGA4P0DJD7 388 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 PGA3P0DJD8 388 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 EDNRAP25101 427 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 UBE2NP61088 152 aaKnown RBP10.41□□□□□ -0.74
SNCA-202ENST00000345009 POU4F2Q12837 409 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 CEACAM16Q2WEN9 425 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 C9orf135Q5VTT2 229 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 ANKRD34AQ69YU3 496 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 AMIGO2Q86SJ2 522 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 JAZF1Q86VZ6 243 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 SYT14Q8NB59 555 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 ACBD4Q8NC06 268 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 NOXO1Q8NFA2 376 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 OR2T33Q8NG76 320 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 TEX47Q8TBZ9 253 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 TMEM54Q969K7 222 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 SAMD8Q96LT4 415 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 WFIKKN1Q96NZ8 548 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 TSPAN32Q96QS1 320 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 MRPL13Q9BYD1 178 aaKnown RBP10.41□□□□□ -0.74
SNCA-202ENST00000345009 NTN4Q9HB63 628 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 TBC1D23Q9NUY8 699 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 CRIM1Q9NZV1 1036 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 IL20RAQ9UHF4 553 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 AMDHD2Q9Y303 409 aa10.41□□□□□ -0.74
SNCA-202ENST00000345009 CELSR2Q9HCU4 2923 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 PRSS37A4D1T9 235 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 DHHO43323 396 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 BAG2O95816 211 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 TXNDC12O95881 172 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 RENP00797 406 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 IFNGP01579 166 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 ITGA5P08648 1049 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 NPR2P20594 1047 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 PRKACGP22612 351 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 COL8A1P27658 744 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 SSTR2P30874 369 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 ARF1P84077 181 aaKnown RBP10.4□□□□□ -0.74
SNCA-202ENST00000345009 KRR1Q13601 381 aaKnown RBP10.4□□□□□ -0.74
SNCA-202ENST00000345009 DAZAP2Q15038 168 aaPredicted RBP10.4□□□□□ -0.74
SNCA-202ENST00000345009 PPA1Q15181 289 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 GABRA6Q16445 453 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 HIST3H3Q16695 136 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 FBXW10Q5XX13 1052 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 DNM1P34Q6PK57 102 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 KLHL17Q6TDP4 642 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 DPPA2Q7Z7J5 298 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 TMEM179BQ7Z7N9 219 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 ICA1LQ8NDH6 482 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 ZNF519Q8TB69 540 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
SNCA-202ENST00000345009 MCHR2Q969V1 340 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 ZC3HAV1LQ96H79 300 aaKnown RBP10.4□□□□□ -0.74
SNCA-202ENST00000345009 BOD1Q96IK1 185 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 Q96M85 177 aa10.4□□□□□ -0.74
SNCA-202ENST00000345009 TSSK6Q9BXA6 273 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms