RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 C12orf57Q99622 126 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RCE1Q9Y256 329 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 GABRPO00591 440 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 OPRD1P41143 372 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 UBAC2Q8NBM4 344 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RTP3Q9BQQ7 232 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 HES7Q9BYE0 225 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ANKRD60Q9BZ19 345 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 A0A0B4J203 849 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF716A6NP11 495 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RAD1O60671 282 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 CNN1P51911 297 aaKnown RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 CLEC9AQ6UXN8 241 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 MIEN1Q9BRT3 115 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 GKN1Q9NS71 199 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 CA14Q9ULX7 337 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PTPRZ1P23471 2315 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 GALR3O60755 368 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 CSF3P09919 207 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 GNB2P62879 340 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 DGAT2L7PQ6IED9 249 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RTP4Q96DX8 246 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RANBP9Q96S59 729 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 NMNAT1Q9HAN9 279 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 LMTK2Q8IWU2 1503 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 IFT172Q9UG01 1749 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF93P35789 620 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PSMB10P40306 273 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RPUSD3Q6P087 351 aaKnown RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RNF113BQ8IZP6 322 aaKnown RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 SDR9C7Q8NEX9 313 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PTDSS2Q9BVG9 487 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 MRPL13Q9BYD1 178 aaKnown RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 UBL3O95164 117 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ANKRD34CP0C6C1 535 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 SLC35E2BP0CK96 405 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PPOXP50336 477 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PXDC1Q5TGL8 231 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PODNL1Q6PEZ8 512 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PLXDC2Q6UX71 529 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF551Q7Z340 670 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ADGRA1Q86SQ6 560 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 DPH2Q9BQC3 489 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 A0A1B0GTQ1 180 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 SLC22A20A6NK97 555 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 FAM183AA6NL82 134 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 PMP2P02689 132 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 RPS26P11Q5JNZ5 115 aaPredicted RBP16.37■□□□□ 0.21
SMAD4-201ENST00000342988 ADAMTS6Q9UKP5 1117 aa16.37■□□□□ 0.21
SMAD4-201ENST00000342988 EN2P19622 333 aaPredicted RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ARNTP27540 789 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 CMPK2Q5EBM0 449 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 PIP5KL1Q5T9C9 394 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF534Q76KX8 674 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 COMMD6Q7Z4G1 85 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF485Q8NCK3 441 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 LILRB1Q8NHL6 650 aaPredicted RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 NUP98P52948 1817 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 G6PCP35575 357 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 NECTIN4Q96NY8 510 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 AMDHD2Q9Y303 409 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 OR2T7P0C7T2 308 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 RPS19P39019 145 aaKnown RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 DHODHQ02127 395 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF468Q5VIY5 522 aaPredicted RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 HRH3Q9Y5N1 445 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 DNAJC5GQ8N7S2 189 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ALOXE3Q9BYJ1 711 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF443Q9Y2A4 671 aaPredicted RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 A0A0J9YY10 115 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 OR2F2O95006 317 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 NDUFB7P17568 137 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 OR2F1Q13607 317 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 IAH1Q2TAA2 248 aaPredicted RBP16.36■□□□□ 0.21
SMAD4-201ENST00000342988 PM20D1Q6GTS8 502 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF583Q96ND8 569 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 TMEM218A2RU14 115 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 HBA1P69905 142 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 TECRLQ5HYJ1 363 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 WDR76Q9H967 626 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 HES4Q9HCC6 221 aa16.36■□□□□ 0.21
SMAD4-201ENST00000342988 TRBV11-1A0A0K0K1C0 115 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 A0A1W2PP55 124 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 HTR4Q13639 388 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 ETFDHQ16134 617 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 HAGHQ16775 308 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF595Q8IYB9 648 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 OR9Q2Q8NGE9 314 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 CXorf58Q96LI9 332 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 ZFYVE21Q9BQ24 234 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 ABHD16AO95870 558 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 DTD1Q8TEA8 209 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 F2RL3Q96RI0 385 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 CNMDO75829 334 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 COX5AP20674 150 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 CLEC12BQ2HXU8 276 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 PKMYT1Q99640 499 aa16.35■□□□□ 0.21
SMAD4-201ENST00000342988 ZNF395Q9H8N7 513 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms