RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 RPS15P62841 145 aaKnown RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 TRIP6Q15654 476 aaKnown RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 PGGHGQ32M88 737 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 SLC6A19Q695T7 634 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF782Q6ZMW2 699 aaPredicted RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 TMEM91Q6ZNR0 172 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 GNRHR2Q96P88 292 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 FOXJ2Q9P0K8 574 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF407Q9C0G0 2248 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 TVP23AA6NH52 213 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 PRR23D1E9PI22 279 aaPredicted RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 H3BMH7 237 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 GPANK1O95872 356 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 HLA-DQB1P01920 261 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 PRR23D2P0DMB1 279 aaPredicted RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 FPR3P25089 353 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 CTXN1P60606 82 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 ZNF169Q14929 603 aaPredicted RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 OR4K17Q8NGC6 315 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 Q96M85 177 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 TMEM43Q9BTV4 400 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 BCL2L14Q9BZR8 327 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 CCDC86Q9H6F5 360 aaKnown RBP11.84□□□□□ -0.51
COL18A1-201ENST00000342220 UBQLN2Q9UHD9 624 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 EDARQ9UNE0 448 aa11.84□□□□□ -0.51
COL18A1-201ENST00000342220 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 MCIDASD6RGH6 385 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 TEX46H3BTG2 121 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 RNF13O43567 381 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 IFNA7P01567 189 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 APOC1P02654 83 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ARHGDIBP52566 201 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 SLC26A5P58743 744 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 RRAS2P62070 204 aaPredicted RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 MZT2BQ6NZ67 158 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF620Q6ZNG0 422 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 VASH2Q86V25 355 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 APCDD1LQ8NCL9 501 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF222Q9UK12 451 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ING4Q9UNL4 249 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 PCDHGB7Q9Y5F8 929 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 MED13Q9UHV7 2174 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF292O60281 2723 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 A0A1W2PNR3 127 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 DOK2O60496 412 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 RPP14O95059 124 aaKnown RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 MT-CO3P00414 261 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 IGKV3-11P04433 115 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ACSM4P0C7M7 580 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 DLSTP36957 453 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 STAT5AP42229 794 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 INPP1P49441 399 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 MELKQ14680 651 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 CARD17Q5XLA6 110 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF57Q68EA5 555 aaPredicted RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF322Q6U7Q0 402 aaPredicted RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 TIPARPQ7Z3E1 657 aaKnown RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 NR2C2APQ86WQ0 139 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ADIPOR1Q96A54 375 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 C3orf49Q96BT1 292 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 TAS2R10Q9NYW0 307 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 NTMQ9P121 344 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 ING1Q9UK53 422 aaPredicted RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 EXOGQ9Y2C4 368 aaKnown RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 SIRT4Q9Y6E7 314 aaPredicted RBP11.83□□□□□ -0.52
COL18A1-201ENST00000342220 CDH10Q9Y6N8 788 aa11.83□□□□□ -0.52
COL18A1-201ENST00000342220 IGKV3D-11A0A0A0MRZ8 115 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 A0A0B4J2E0 115 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 A0A1B0GX12 115 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 CHP2O43745 196 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 RCBTB2O95199 551 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 IL33O95760 270 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 CD59P13987 128 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 HTR1FP30939 366 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF81P51508 661 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ISXQ2M1V0 245 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 IDNKQ5T6J7 187 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 PRAMEF8Q5VWM4 474 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 PRAMEF7Q5VXH5 474 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 CDH26Q8IXH8 852 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 GPR137Q96N19 417 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 PCNX3Q9H6A9 2034 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 TEX13CA0A0J9YWL9 993 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 A0A1B0GVC2 190 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 FRG2CA6NGY1 282 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 A6NIN4 97 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 J3QLW9 94 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 LGALS8O00214 317 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 IGHA1P01876 353 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ZNF19P17023 458 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 ELK1P19419 428 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 EIF1AXP47813 144 aaKnown RBP11.82□□□□□ -0.52
COL18A1-201ENST00000342220 OR7A5Q15622 319 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 CLLU1Q5K131 121 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 GPR139Q6DWJ6 353 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 MZT2AQ6P582 158 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 DUSP18Q8NEJ0 188 aa11.82□□□□□ -0.52
COL18A1-201ENST00000342220 COPZ2Q9P299 210 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms