RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 KLHL28Q9NXS3 571 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 DIMT1Q9UNQ2 313 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 PMP2P02689 132 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GLP1RP43220 463 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SMAD3P84022 425 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM132DQ14C87 1099 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SSX1Q16384 188 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 XYLT1Q86Y38 959 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 DYRK2Q92630 601 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TBL1YQ9BQ87 522 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 MCRIP2Q9BUT9 160 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SRRQ9GZT4 340 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FBXO44Q9H4M3 255 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 BANF2Q9H503 90 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 EPHX3Q9H6B9 360 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 EDIL3O43854 480 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 IFNA1P01562 189 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TTRP02766 147 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CXADRP78310 365 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 H3F3AP84243 136 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 BIVMQ86UB2 503 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 OR4E2Q8NGC2 313 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 STACQ99469 402 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GAL3ST2Q9H3Q3 398 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 MIEF1Q9NQG6 463 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 BORCS7-ASMTA0A0B4J1R7 106 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 DRGXA6NNA5 263 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FZD9O00144 591 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 OR10H2O60403 315 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 NFATC1O95644 943 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ADH5P11766 374 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CR2P20023 1033 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CNR1P21554 472 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 PAICSP22234 425 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SELENOVP59797 346 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 PCLAFQ15004 111 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 BCL2L15Q5TBC7 163 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ASB5Q8WWX0 329 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 IL22RA2Q969J5 263 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 NEU1Q99519 415 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 G6PC3Q9BUM1 346 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SNRNP25Q9BV90 132 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ADAP2Q9NPF8 381 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CGB1A6NKQ9 187 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 UMAD1C9J7I0 102 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CEACAM6P40199 344 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 WFDC12Q8WWY7 111 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 PARD6AQ9NPB6 346 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FAM212BQ9NTI7 297 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CRLS1Q9UJA2 301 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GABRR3A8MPY1 467 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 USF1P22415 310 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SFTPDP35247 375 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 KIR3DL1P43629 444 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CLDN17P56750 224 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SLC25A11Q02978 314 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF763Q0D2J5 394 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FAM74A3Q4VXF1 159 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TP53I3Q53FA7 332 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 C6orf15Q6UXA7 325 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 KCNRGQ8N5I3 272 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 OR13C5Q8NGS8 318 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 A0A1W2PPH5 198 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 YIF1AO95070 293 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 IFNA6P05013 189 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 METTL15P1P0C7V9 234 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FOLR1P15328 257 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CPT2P23786 658 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 DCST1Q5T197 706 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 LEMD1Q68G75 181 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 AMIGO3Q86WK7 504 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ELP4Q96EB1 424 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM175Q9BSA9 504 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 SLC25A18Q9H1K4 315 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 KCNJ16Q9NPI9 418 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 DMRT3Q9NQL9 472 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 KLHL13Q9P2N7 655 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TMEM14AQ9Y6G1 99 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 RPS10-NUDT3A0A1W2PQS6 291 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 C6orf47O95873 294 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 WDR5P61964 334 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ZNF791Q3KP31 576 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GPR157Q5UAW9 335 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ADNP2Q6IQ32 1131 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ERN2Q76MJ5 926 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ZFAND4Q86XD8 727 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 VRK3Q8IV63 474 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 CREB3L4Q8TEY5 395 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 RAB39BQ96DA2 213 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 LRRC46Q96FV0 321 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ARL6Q9H0F7 186 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 HOXB5P09067 269 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 FKBP2P26885 142 aaKnown RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 ACSF3Q4G176 576 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 TPGS2Q68CL5 300 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 RANBP3LQ86VV4 465 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 LILRB2Q8N423 598 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GRAPLQ8TC17 118 aaPredicted RBP3.27□□□□□ -1.89
SYNE1-201ENST00000341594 PIGQQ9BRB3 760 aa3.27□□□□□ -1.89
SYNE1-201ENST00000341594 GSTO2Q9H4Y5 243 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms