RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 PGCP20142 388 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 VEGFCP49767 419 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 SCAND1P57086 179 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 TAS2R20P59543 309 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 RPS15P62841 145 aaKnown RBP13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 HSD11B2P80365 405 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 PLCXD2Q0VAA5 305 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 METTL11BQ5VVY1 283 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 C1QL3Q5VWW1 255 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 OLFML2AQ68BL7 652 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 TEX261Q6UWH6 196 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 MAMDC2Q7Z304 686 aaPredicted RBP13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 PRSS35Q8N3Z0 413 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 OTOSQ8NHW6 89 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 CEP76Q8TAP6 659 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 METTL21AQ8WXB1 218 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 DAZLQ92904 295 aaKnown RBP13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 DCBLD2Q96PD2 775 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 CITED4Q96RK1 184 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 TBL1XR1Q9BZK7 514 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 ZNF436Q9C0F3 470 aaPredicted RBP13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 DIABLOQ9NR28 239 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 NPTNQ9Y639 398 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 U3KQ87 197 aa13.63□□□□□ -0.23
TNFSF13-201ENST00000338784 BRWD1Q9NSI6 2320 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 TRAV8-7A0A075B6U6 113 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 TO15178 435 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 TSPAN2O60636 221 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 SDC3O75056 442 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 GPANK1O95872 356 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 MT-ATP6P00846 226 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 TPOP07202 933 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 GP1BBP13224 206 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 DNASE1P24855 282 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 ZP1P60852 638 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 HNRNPKP61978 463 aaKnown RBP eCLIP13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 NSDHLQ15738 373 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 ZNF227Q86WZ6 799 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 SLC25A36Q96CQ1 311 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 DNAJA3Q96EY1 480 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 LMAN1LQ9HAT1 526 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 B3GNT2Q9NY97 397 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 KCNG2Q9UJ96 466 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 ELF5Q9UKW6 265 aaPredicted RBP13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 A0A1B0GUH1 482 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 C17orf51A8MQB3 221 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 NOS1APO75052 506 aaPredicted RBP13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 HLA-DQA2P01906 255 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 PTHLHP12272 177 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 FOSL1P15407 271 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 DMWDQ09019 674 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 CBFBQ13951 182 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 SGCBQ16585 318 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 ODF4Q2M2E3 257 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 COL28A1Q2UY09 1125 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 VWA2Q5GFL6 755 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 PRAMEF17Q5VTA0 474 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 LRRC69Q6ZNQ3 347 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 OR51A4Q8NGJ6 313 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 OR10AC1Q8NH08 325 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 PIGKQ92643 395 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 THRSPQ92748 146 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 C4orf45Q96LM5 186 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 AMELYQ99218 206 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 WWTR1Q9GZV5 400 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 NOX3Q9HBY0 568 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 COPS7AQ9UBW8 275 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 STEAP1Q9UHE8 339 aa13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 ING1Q9UK53 422 aaPredicted RBP13.62□□□□□ -0.23
TNFSF13-201ENST00000338784 PRSS37A4D1T9 235 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 ARPC1BO15143 372 aaKnown RBP13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 PLGP00747 810 aaPredicted RBP13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 FBLP22087 321 aaKnown RBP13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 OR3A3P47888 321 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 EFNA3P52797 238 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 RPL27P61353 136 aaKnown RBP13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 SLC29A4Q7RTT9 530 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 KANSL1Q7Z3B3 1105 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 SIX5Q8N196 739 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 OR8K3Q8NH51 312 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 OR1L3Q8NH93 324 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 ASB17Q8WXJ9 295 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 MCHR2Q969V1 340 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 OMA1Q96E52 524 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 PTDSS2Q9BVG9 487 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 ULBP3Q9BZM4 244 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 ZNF304Q9HCX3 659 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 B9D1Q9UPM9 204 aa13.61□□□□□ -0.23
TNFSF13-201ENST00000338784 H3BSH0 61 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 XRCC3O43542 346 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 GLSO94925 669 aaPredicted RBP13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 TMIGD3P0DMS9 266 aaPredicted RBP13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 ABCD3P28288 659 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 DCTDP32321 178 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 KIR3DL2P43630 455 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 CENPAP49450 140 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 POLR2HP52434 150 aaKnown RBP13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 PNLIPRP2P54317 469 aa13.6□□□□□ -0.23
TNFSF13-201ENST00000338784 OR1D5P58170 312 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms