RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OR9K2Q8NGE7 335 aa13.1□□□□□ -0.31
CBX3-201ENST00000337620 ZNF775Q96BV0 537 aaPredicted RBP13.1□□□□□ -0.31
CBX3-201ENST00000337620 ISOC1Q96CN7 298 aa13.1□□□□□ -0.31
CBX3-201ENST00000337620 SLC25A44Q96H78 314 aaPredicted RBP13.1□□□□□ -0.31
CBX3-201ENST00000337620 ZNF649Q9BS31 505 aa13.1□□□□□ -0.31
CBX3-201ENST00000337620 JAM3Q9BX67 310 aa13.1□□□□□ -0.31
CBX3-201ENST00000337620 MFRPQ9BY79 579 aa13.1□□□□□ -0.31
CBX3-201ENST00000337620 ANKRD11Q6UB99 2663 aaPredicted RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 A0A1W2PQL4 384 aaPredicted RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 K7EM74 188 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 IGHG1P01857 330 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 CD36P16671 472 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 NR4A1P22736 598 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 ACTC1P68032 377 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 ACTA1P68133 377 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 ASB18Q6ZVZ8 466 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 OR6X1Q8NH79 312 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 CPNE4Q96A23 557 aaPredicted RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 NMD3Q96D46 503 aaKnown RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 FAM122AQ96E09 287 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 RBP7Q96R05 134 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 ALG8Q9BVK2 526 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 TTTY10Q9BZA0 68 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 IGLV1-36A0A0B4J1U3 117 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 ACTL6AO96019 429 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 RPS3AP61247 264 aaKnown RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 GALEQ14376 348 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 POU4F3Q15319 338 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 C3AR1Q16581 482 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 TSTQ16762 297 aaKnown RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 CNPY1Q3B7I2 92 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 VASNQ6EMK4 673 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 TMPRSS11AQ6ZMR5 421 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 SPRYD4Q8WW59 207 aaPredicted RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 ZNF385AQ96PM9 386 aaKnown RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 MRPL13Q9BYD1 178 aaKnown RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 COA3Q9Y2R0 106 aaPredicted RBP13.09□□□□□ -0.31
CBX3-201ENST00000337620 BOD1L1Q8NFC6 3051 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 DNAJC13O75165 2243 aa13.09□□□□□ -0.31
CBX3-201ENST00000337620 KIAA1549Q9HCM3 1950 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 RGS6P49758 472 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 ZNF85Q03923 595 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 BCL2A1Q16548 175 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 TBR1Q16650 682 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 DNM1P34Q6PK57 102 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 FCRLAQ7L513 359 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 SLC16A9Q7RTY1 509 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 RFLNBQ8N5W9 214 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 ZNF420Q8TAQ5 688 aaPredicted RBP13.08□□□□□ -0.32
CBX3-201ENST00000337620 NSMAFQ92636 917 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 EXTL1Q92935 676 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 ADAD1Q96M93 576 aaKnown RBP13.08□□□□□ -0.32
CBX3-201ENST00000337620 OPALINQ96PE5 141 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 SF3B5Q9BWJ5 86 aaKnown RBP13.08□□□□□ -0.32
CBX3-201ENST00000337620 WDR76Q9H967 626 aa13.08□□□□□ -0.32
CBX3-201ENST00000337620 ISG20L2Q9H9L3 353 aaKnown RBP13.08□□□□□ -0.32
CBX3-201ENST00000337620 CAB39Q9Y376 341 aaPredicted RBP13.08□□□□□ -0.32
CBX3-201ENST00000337620 IGKV1D-43A0A0B4J1Z2 117 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 AHCYL1O43865 530 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 SCG5P05408 212 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 TGFBR2P37173 567 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 TMBIM6P55061 237 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 GLO1Q04760 184 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 THEM4Q5T1C6 240 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 ZNF322Q6U7Q0 402 aaPredicted RBP13.07□□□□□ -0.32
CBX3-201ENST00000337620 PLXDC2Q6UX71 529 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 SSX6Q7RTT6 188 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 P2RY8Q86VZ1 359 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 ANKRD13BQ86YJ7 626 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 TIGD4Q8IY51 512 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 NOXO1Q8NFA2 376 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 OR52N1Q8NH53 320 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 C12orf43Q96C57 262 aaKnown RBP13.07□□□□□ -0.32
CBX3-201ENST00000337620 ABHD17AQ96GS6 310 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 INTS14Q96SY0 518 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 TIMP4Q99727 224 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 ARHGAP9Q9BRR9 750 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 SPRR3Q9UBC9 169 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 COPS3Q9UNS2 423 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 PNMA8CA0A1B0GUJ8 204 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 SYNGR4O95473 234 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 RASGEF1BQ0VAM2 473 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 MLLT11Q13015 90 aaPredicted RBP13.07□□□□□ -0.32
CBX3-201ENST00000337620 Q6ZS92 163 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 CHMP1BQ7LBR1 199 aa13.07□□□□□ -0.32
CBX3-201ENST00000337620 RBMXL3Q8N7X1 1067 aaKnown RBP13.07□□□□□ -0.32
CBX3-201ENST00000337620 ZIC4Q8N9L1 334 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms