RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 NMES1Q9C002 83 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 BARX1Q9HBU1 254 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 A6NIN4 97 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 STC2O76061 302 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SMIM17P0DL12 118 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 AHRP35869 848 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OTUD1Q5VV17 481 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 H2BFWTQ7Z2G1 175 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PRICKLE2Q7Z3G6 844 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 VGLL2Q8N8G2 317 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OR52B6Q8NGF0 335 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PEBP4Q96S96 227 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 VSX1Q9NZR4 365 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 TRAPPC2LQ9UL33 140 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 PADI1Q9ULC6 663 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OR2A25A4D2G3 310 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SYT5O00445 386 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ILKQ13418 452 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 Q6ZN92 141 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 AMIGO3Q86WK7 504 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OR2A1Q8NGT9 310 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 GPX8Q8TED1 209 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 DUS3LQ96G46 650 aaKnown RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 OR5B2Q96R09 309 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 SORT1Q99523 831 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 DPH7Q9BTV6 452 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 FBXO34Q9NWN3 711 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF443Q9Y2A4 671 aaPredicted RBP5.74□□□□□ -1.49
CSMD1-201ENST00000335551 B3GALT5Q9Y2C3 310 aa5.74□□□□□ -1.49
CSMD1-201ENST00000335551 M0R1X1 148 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SNRPBP14678 240 aaKnown RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CR2P20023 1033 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF280AP59817 542 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 RBPJQ06330 500 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ELOBQ15370 118 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FXNQ16595 210 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 RAB6CQ53S08 254 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 GGNBP1Q5YKI7 109 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR2M3Q8NG83 312 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SELENOIQ9C0D9 397 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PLEKHA2Q9HB19 425 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 MMP26Q9NRE1 261 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PMP2P02689 132 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SNHG28P0DPA3 235 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 HTR1FP30939 366 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 XCR1P46094 333 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR8G2PQ6IF36 304 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PODNL1Q6PEZ8 512 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 KLHDC8AQ8IYD2 350 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 GLIS1Q8NBF1 620 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SEC22AQ96IW7 307 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SLC35E1Q96K37 410 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM175Q9BSA9 504 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 HERPUD2Q9BSE4 406 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PSORS1C1Q9UIG5 152 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 RNF24Q9Y225 148 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TRAPPC1Q9Y5R8 145 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SNRPGP15A8MWD9 76 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 AP1G1O43747 822 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ADAMTS4O75173 837 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 DEDDO75618 318 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CLEC3BP05452 202 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TPOP07202 933 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TIMP2P16035 220 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 RABGGTBP53611 331 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SHC2P98077 582 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FAM57BQ71RH2 274 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SPRED1Q7Z699 444 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CDC20BQ86Y33 519 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR10J5Q8NHC4 309 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CIB3Q96Q77 187 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TAAR9Q96RI9 348 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FAM117AQ9C073 453 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 OR52D1Q9H346 318 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 DMRT3Q9NQL9 472 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SLC22A20A6NK97 555 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TFAP2AP05549 437 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 C2orf27AQ580R0 203 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 SLC46A3Q7Z3Q1 461 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 NAGSQ8N159 534 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CISD2Q8N5K1 135 aaKnown RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 FAM3DQ96BQ1 224 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 NPY6RQ99463 290 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 HEYLQ9NQ87 328 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ACSS1Q9NUB1 689 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 PADI3Q9ULW8 664 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 NPIPB15A6NHN6 443 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TYRP1P17643 537 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CSF2RBP32927 897 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CARD18P57730 90 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ZNF85Q03923 595 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ELAVL3Q14576 367 aaKnown RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 CLPPQ16740 277 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 ANKRD16Q6P6B7 361 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 C11orf42Q8N5U0 333 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 METTL27Q8N6F8 245 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 TMEM106AQ96A25 262 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 NDUFB11Q9NX14 153 aa5.73□□□□□ -1.49
CSMD1-201ENST00000335551 GDF2Q9UK05 429 aaPredicted RBP5.73□□□□□ -1.49
CSMD1-201ENST00000335551 MOKQ9UQ07 419 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms