RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CCDC182A6NF36 153 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 AKAP8O43823 692 aaKnown RBP19.03■□□□□ 0.64
TPM1-204ENST00000334895 GLI4P10075 376 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 SPI1P17947 270 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 PAICSP22234 425 aaKnown RBP19.03■□□□□ 0.64
TPM1-204ENST00000334895 CLRN1P58418 232 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 FOXF2Q12947 444 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 MEDAGQ5VYS4 303 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 C20orf196Q8IYI0 205 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 NAXEQ8NCW5 288 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 TTYH2Q9BSA4 534 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 OR51V1Q9H2C8 321 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 AMBNQ9NP70 447 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 CLN6Q9NWW5 311 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 SH3BGRL2Q9UJC5 107 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 PHF3Q92576 2039 aaKnown RBP19.03■□□□□ 0.64
TPM1-204ENST00000334895 CENPBD1B2RD01 187 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 PRODHO43272 600 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 AHCYL1O43865 530 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 XPNPEP2O43895 674 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 MRPL33O75394 65 aaKnown RBP19.03■□□□□ 0.64
TPM1-204ENST00000334895 CSNK1A1P48729 337 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 ETFDHQ16134 617 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 OR2A2Q6IF42 318 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 LRFN4Q6PJG9 635 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 OR51L1Q8NGJ5 315 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 KISS1RQ969F8 398 aaPredicted RBP19.03■□□□□ 0.64
TPM1-204ENST00000334895 RHNO1Q9BSD3 238 aa19.03■□□□□ 0.64
TPM1-204ENST00000334895 IGLV1-36A0A0B4J1U3 117 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 SLC1A7O00341 560 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 SLC43A1O75387 559 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 UPK3AO75631 287 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 PYCR1P32322 319 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 TIMP3P35625 211 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 KIR2DL2P43627 348 aaPredicted RBP19.02■□□□□ 0.64
TPM1-204ENST00000334895 APOFQ13790 326 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 KLHL12Q53G59 568 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 B3GLCTQ6Y288 498 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 FAM214BQ7L5A3 538 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 ZBTB46Q86UZ6 589 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 ZNF786Q8N393 782 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 MCHR2Q969V1 340 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 Q96MT0 163 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 SRA1Q9HD15 236 aaKnown RBP19.02■□□□□ 0.64
TPM1-204ENST00000334895 GLTPQ9NZD2 209 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 B9D1Q9UPM9 204 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 FKBP7Q9Y680 259 aa19.02■□□□□ 0.64
TPM1-204ENST00000334895 ESPL1Q14674 2120 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 SH3D21A4FU49 640 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 FAM171A2A8MVW0 826 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 PYCARD-AS1I3L0S3 204 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 SLC16A7O60669 478 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 TNFSF13O75888 250 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 SMNDC1O75940 238 aaKnown RBP eCLIP19.01■□□□□ 0.631e-8■■□□□ 11.9
TPM1-204ENST00000334895 CEACAM8P31997 349 aaPredicted RBP19.01■□□□□ 0.63
TPM1-204ENST00000334895 CDH11P55287 796 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 CXCR4P61073 352 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 SIRPAP78324 504 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 MRPL49Q13405 166 aaKnown RBP19.01■□□□□ 0.63
TPM1-204ENST00000334895 IGFBP7Q16270 282 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 THEM4Q5T1C6 240 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 LINC01590Q5TEZ4 76 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 TSPO2Q5TGU0 170 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 MEPCEQ7L2J0 689 aaKnown RBP19.01■□□□□ 0.63
TPM1-204ENST00000334895 LINGO2Q7L985 606 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 GID4Q8IVV7 300 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 BPIFB6Q8NFQ5 453 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 OR6N1Q8NGY5 312 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 C12orf49Q9H741 205 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 PARPBPQ9NWS1 579 aa19.01■□□□□ 0.63
TPM1-204ENST00000334895 INTS1Q8N201 2190 aaKnown RBP19.01■□□□□ 0.63
TPM1-204ENST00000334895 M0R3G1 203 aa19■□□□□ 0.63
TPM1-204ENST00000334895 QDPRP09417 244 aa19■□□□□ 0.63
TPM1-204ENST00000334895 HTR1FP30939 366 aa19■□□□□ 0.63
TPM1-204ENST00000334895 ZNF133P52736 654 aaPredicted RBP19■□□□□ 0.63
TPM1-204ENST00000334895 ZNF91Q05481 1191 aa19■□□□□ 0.63
TPM1-204ENST00000334895 SLC25A47Q6Q0C1 308 aa19■□□□□ 0.63
TPM1-204ENST00000334895 LYPD4Q6UWN0 246 aa19■□□□□ 0.63
TPM1-204ENST00000334895 NCCRP1Q6ZVX7 275 aaPredicted RBP19■□□□□ 0.63
TPM1-204ENST00000334895 OR2T4Q8NH00 348 aa19■□□□□ 0.63
TPM1-204ENST00000334895 RBP7Q96R05 134 aa19■□□□□ 0.63
TPM1-204ENST00000334895 TEAD3Q99594 435 aa19■□□□□ 0.63
TPM1-204ENST00000334895 RERGLQ9H628 205 aa19■□□□□ 0.63
TPM1-204ENST00000334895 GPANK1O95872 356 aa19■□□□□ 0.63
TPM1-204ENST00000334895 IGHV3-9P01782 118 aa19■□□□□ 0.63
TPM1-204ENST00000334895 CA7P43166 264 aa19■□□□□ 0.63
TPM1-204ENST00000334895 VWA1Q6PCB0 445 aa19■□□□□ 0.63
TPM1-204ENST00000334895 PROKR2Q8NFJ6 384 aa19■□□□□ 0.63
TPM1-204ENST00000334895 APH1AQ96BI3 265 aa19■□□□□ 0.63
TPM1-204ENST00000334895 ZNF837Q96EG3 531 aaPredicted RBP19■□□□□ 0.63
TPM1-204ENST00000334895 ALKBH3Q96Q83 286 aaPredicted RBP19■□□□□ 0.63
TPM1-204ENST00000334895 RACGAP1Q9H0H5 632 aa19■□□□□ 0.63
TPM1-204ENST00000334895 SLCO5A1Q9H2Y9 848 aa19■□□□□ 0.63
TPM1-204ENST00000334895 SLC7A10Q9NS82 523 aa19■□□□□ 0.63
TPM1-204ENST00000334895 PLCXD1Q9NUJ7 323 aa19■□□□□ 0.63
TPM1-204ENST00000334895 H2AFY2Q9P0M6 372 aaPredicted RBP19■□□□□ 0.63
TPM1-204ENST00000334895 TRGV8A0A0C4DH27 118 aa18.99■□□□□ 0.63
TPM1-204ENST00000334895 TMIGD3P0DMS9 266 aaPredicted RBP18.99■□□□□ 0.63
TPM1-204ENST00000334895 DBTP11182 482 aaKnown RBP18.99■□□□□ 0.63
TPM1-204ENST00000334895 CRHBPP24387 322 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms