RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 KCTD12Q96CX2 325 aaKnown RBP11.9□□□□□ -0.51
VSTM4-202ENST00000332853 YIPF6Q96EC8 236 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 C12orf49Q9H741 205 aa11.9□□□□□ -0.51
VSTM4-202ENST00000332853 FAM166BA8MTA8 275 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 OR2J2O76002 312 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 BPNT1O95861 308 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ZGLP1P0C6A0 271 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ELK1P19419 428 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 PRRT1Q99946 306 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 SLA2Q9H6Q3 261 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 SLAMF7Q9NQ25 335 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 CORINQ9Y5Q5 1042 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 IGHV3-15A0A0B4J1V0 119 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 APOC3P02656 99 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 GLULP15104 373 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 GCH1P30793 250 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 TEKQ02763 1124 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ACKR1Q16570 336 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF695Q8IW36 515 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 STEAP2Q8NFT2 490 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 GPR119Q8TDV5 335 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ORAI1Q96D31 301 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 METTL17Q9H7H0 456 aaPredicted RBP11.89□□□□□ -0.51
VSTM4-202ENST00000332853 MRPS28Q9Y2Q9 187 aaKnown RBP11.89□□□□□ -0.51
VSTM4-202ENST00000332853 YKT6O15498 198 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 PRAF2O60831 178 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF709Q8N972 641 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 CTSFQ9UBX1 484 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 STEAP1Q9UHE8 339 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 M0QYG6 137 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 MT-ATP6P00846 226 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 GPNMBQ14956 572 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 PIGTQ969N2 578 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 C7orf50Q9BRJ6 194 aaKnown RBP11.89□□□□□ -0.51
VSTM4-202ENST00000332853 NUP214P35658 2090 aaPredicted RBP11.89□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF44P15621 663 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 SDHAP31040 664 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 HSF1Q00613 529 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 FCRL6Q6DN72 434 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 NPSR1Q6W5P4 371 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 SELENOIQ9C0D9 397 aa11.89□□□□□ -0.51
VSTM4-202ENST00000332853 SNAPC5O75971 98 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 IGHEP01854 428 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 HOXB5P09067 269 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 GAAP10253 952 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 RAC2P15153 192 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 PCBD1P61457 104 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 MEF2DQ14814 521 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 KCNJ8Q15842 424 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 RPS19BP1Q86WX3 136 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 PDZD9Q8IXQ8 264 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 ZNF454Q8N9F8 522 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 GPR32P1Q8NGA4 272 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 IGHV5-51A0A0C4DH38 117 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 PRAMEF27A3QJZ7 478 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 TRIM64CA6NLI5 447 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 DNAJB6O75190 326 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 CYB561P49447 251 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 PCBP4P57723 403 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 PRAMEF9Q5VWM5 478 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 IDO2Q6ZQW0 420 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 HINT2Q9BX68 163 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 LAT2Q9GZY6 243 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 OBP2BQ9NPH6 170 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 ASF1BQ9NVP2 202 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 MECP2P51608 486 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 ATP1B3P54709 279 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 GK2Q14410 553 aaPredicted RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 CPEB2Q7Z5Q1 589 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 KIAA0907Q7Z7F0 614 aaPredicted RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 DYNC2LI1Q8TCX1 351 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 RBFOX1Q9NWB1 397 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 FBXO34Q9NWN3 711 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 MED29Q9NX70 200 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 OR14J1Q9UGF5 321 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 CCDC163A0A0D9SF12 145 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 APOBEC1P41238 236 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 MLC1Q15049 377 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 EXT1Q16394 746 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 YOD1Q5VVQ6 348 aaPredicted RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 VHLLQ6RSH7 139 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 C12orf45Q8N5I9 185 aaPredicted RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 OR4K15Q8NH41 348 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 FAM3DQ96BQ1 224 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 SMIM3Q9BZL3 60 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 SHISA8B8ZZ34 492 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 IFNA5P01569 189 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 EIF1P41567 113 aaKnown RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 CAV2P51636 162 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 CLDN6P56747 220 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 MFAP5Q13361 173 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 FAM53BQ14153 422 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 C6orf15Q6UXA7 325 aaPredicted RBP11.88□□□□□ -0.51
VSTM4-202ENST00000332853 SPEM1Q8N4L4 309 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 TMEM59Q9BXS4 323 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 FSCN3Q9NQT6 498 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 TAS2R4Q9NYW5 299 aa11.88□□□□□ -0.51
VSTM4-202ENST00000332853 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms