RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 RRM2BQ7LG56 351 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 TRPM8Q7Z2W7 1104 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 NOXO1Q8NFA2 376 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 SEPHS2Q99611 448 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 SMR3AQ99954 134 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 MRPL13Q9BYD1 178 aaKnown RBP23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 NMNAT1Q9HAN9 279 aaPredicted RBP23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 MAGEL2Q9UJ55 1249 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 PMF1-BGLAPU3KQ54 211 aa23.98■■□□□ 1.43
ATPAF1-201ENST00000329231 A0A087WUU8 490 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 IGHV2OR16-5A0A0B4J2B6 119 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 UBL3O95164 117 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 OR8G3PP0DMU2 310 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 ACADSP16219 412 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 MAKP20794 623 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 ACVR1BP36896 505 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 RUNX1T1Q06455 604 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 PIGFQ07326 219 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 TNK1Q13470 666 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 RAB35Q15286 201 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 MBOAT2Q6ZWT7 520 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 MYPOPQ86VE0 399 aaPredicted RBP23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 SLC22A24Q8N4F4 322 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 NUP37Q8NFH4 326 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 MCHR2Q969V1 340 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 TXNIPQ9H3M7 391 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 TMEM38BQ9NVV0 291 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 FBXL3Q9UKT7 428 aa23.97■■□□□ 1.43
ATPAF1-201ENST00000329231 EFCAB9A8MZ26 197 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 H7C417 338 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 TRMUO75648 421 aaKnown RBP23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 FARS2O95363 451 aaKnown RBP23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 RAB36O95755 333 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 RHCEP18577 417 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 SERPINF1P36955 418 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 SLC9A3P48764 834 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 ZNF84P51523 738 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 ARMC4Q5T2S8 1044 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 CLEC9AQ6UXN8 241 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 TSEN54Q7Z6J9 526 aaKnown RBP23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 OAFQ86UD1 273 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 SYT14Q8NB59 555 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 FBXO17Q96EF6 278 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 ZNF347Q96SE7 839 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 ZNF224Q9NZL3 707 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 NDUFAF4Q9P032 175 aa23.96■■□□□ 1.43
ATPAF1-201ENST00000329231 VSTM5A8MXK1 200 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 PDE5AO76074 875 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 H1F0P07305 194 aaKnown RBP23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 NR2C1P13056 603 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 GIPRP48546 466 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 PTDSS1P48651 473 aaKnown RBP23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 RAB1AP62820 205 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 HGFACQ04756 655 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 SWI5Q1ZZU3 235 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 VHLLQ6RSH7 139 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 TBPL2Q6SJ96 375 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 RINLQ6ZS11 566 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 SKA3Q8IX90 412 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 OR51A7Q8NH64 312 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 NOX3Q9HBY0 568 aa23.95■■□□□ 1.42
ATPAF1-201ENST00000329231 A0A1W2PRQ8 180 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 NUDT6P53370 316 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 MYBPC1Q00872 1141 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 DGCR6Q14129 220 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 MST1LQ2TV78 715 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 NRN1LQ496H8 165 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 DPPA2Q7Z7J5 298 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 MEX3DQ86XN8 651 aaKnown RBP23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 ARHGAP24Q8N264 748 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 C7orf34Q96L11 122 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 ZNF75AQ96N20 296 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 ZNF442Q9H7R0 627 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 TMEM5Q9Y2B1 443 aa23.94■■□□□ 1.42
ATPAF1-201ENST00000329231 C2CD3Q4AC94 2353 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 TRAV27A0A087WT01 109 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 B9A039 149 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 SSX4O60224 188 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 IGHMP01871 453 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 OR4A8P0C604 315 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 ZNF14P17017 642 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 ITGA2P17301 1181 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 MSX2P35548 267 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 CTXN1P60606 82 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 RPL27P61353 136 aaKnown RBP23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 SNRPD2P62316 118 aaKnown RBP23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 TOP3AQ13472 1001 aaPredicted RBP23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 ADIPOQQ15848 244 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 TMPRSS11FQ6ZWK6 438 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 FAM86B1Q8N7N1 296 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 SLC7A13Q8TCU3 470 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 MS4A3Q96HJ5 214 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 PYURFQ96I23 114 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 NSMCE2Q96MF7 247 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 TNFRSF13CQ96RJ3 184 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 C1orf21Q9H246 121 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 SMURF2Q9HAU4 748 aa23.93■■□□□ 1.42
ATPAF1-201ENST00000329231 hCG_2039718K7EN88 272 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 ARPC2O15144 300 aa23.92■■□□□ 1.42
ATPAF1-201ENST00000329231 MGRN1O60291 552 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms