RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 NXNL2Q5VZ03 156 aa15.21■□□□□ 0.03
SMAD3-201ENST00000327367 VHLLQ6RSH7 139 aa15.21■□□□□ 0.03
SMAD3-201ENST00000327367 OR2T27Q8NH04 317 aa15.21■□□□□ 0.03
SMAD3-201ENST00000327367 APH1BQ8WW43 257 aa15.21■□□□□ 0.03
SMAD3-201ENST00000327367 SLIT2O94813 1529 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 A8MVM7 634 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 LCTLQ6UWM7 567 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 TOMM20LQ6UXN7 152 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 TMEM25Q86YD3 366 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 UBAC2Q8NBM4 344 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 ZCCHC4Q9H5U6 513 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 GAREM1Q9H706 876 aa15.21■□□□□ 0.02
SMAD3-201ENST00000327367 CHEK1O14757 476 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 SMAD6O43541 496 aaKnown RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 SUSD5O60279 629 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 HENMT1Q5T8I9 393 aaKnown RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 USB1Q9BQ65 265 aaKnown RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 VAMP8Q9BV40 100 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 MOB1AQ9H8S9 216 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ZDHHC11Q9H8X9 412 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 IGHG1P01857 330 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CSF3P09919 207 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 GLIPR1L1Q6UWM5 242 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ZNF620Q6ZNG0 422 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 MBOAT2Q6ZWT7 520 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 MRPL10Q7Z7H8 261 aaKnown RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 KIAA1958Q8N8K9 716 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 GINS3Q9BRX5 216 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ZNF385DQ9H6B1 395 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 OR52A1Q9UKL2 312 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 SLC35A3Q9Y2D2 325 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 MROH2AA6NES4 1674 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ROBO1Q9Y6N7 1651 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 NANOGP1Q8N7R0 232 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CMBLQ96DG6 245 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 NECAP2Q9NVZ3 263 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 LAMP3Q9UQV4 416 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CHD1O14646 1710 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 GPRIN2O60269 458 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CD63P08962 238 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 SFTA3P0C7M3 94 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CTSCP53634 463 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 PCBP3P57721 371 aaKnown RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 RING1Q06587 406 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 Q1RN00 199 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ZNF684Q5T5D7 378 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 TEX261Q6UWH6 196 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 RBM45Q8IUH3 476 aaKnown RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 IL22RA1Q8N6P7 574 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 U3KQ87 197 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ZNF93P35789 620 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ZNF140P52738 457 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-201ENST00000327367 C15orf39Q6ZRI6 1047 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 OR52E1Q8NGJ3 308 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 CMTM2Q8TAZ6 248 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 ABHD6Q9BV23 337 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 NUDT9Q9BW91 350 aa15.2■□□□□ 0.02
SMAD3-201ENST00000327367 A0A1W2PNV4 684 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 MAT1AQ00266 395 aaKnown RBP15.19■□□□□ 0.02
SMAD3-201ENST00000327367 BAMBIQ13145 260 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 CATR1Q13166 79 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 OTUD1Q5VV17 481 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-201ENST00000327367 OPN5Q6U736 354 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 PRSS42Q7Z5A4 293 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ADGRE4PQ86SQ3 457 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 LGI3Q8N145 548 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ALOX5APP20292 161 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 CLDN17P56750 224 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 KCNJ10P78508 379 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SPRYD7Q5W111 196 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 AUNIPQ9H7T9 357 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 WDR76Q9H967 626 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ACOXLQ9NUZ1 547 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SLC2A8Q9NY64 477 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ETV7Q9Y603 341 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 LOC102725191A0A1B0GVB3 256 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 BTBD17A6NE02 478 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SOX15O60248 233 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 RPL13AP40429 203 aaKnown RBP15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ZNF534Q76KX8 674 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 LMF2Q9BU23 707 aaKnown RBP15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ENKD1Q9H0I2 346 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 HEYLQ9NQ87 328 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SLIT3O75094 1523 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SLC2A10O95528 541 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SOD2P04179 222 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SELENBP1Q13228 472 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 CST6Q15828 149 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 ACOT7LQ6ZUV0 252 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 LFNGQ8NES3 379 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 GABRQQ9UN88 632 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 AIFM1O95831 613 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 OR2B11Q5JQS5 317 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 BTLAQ7Z6A9 289 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 PPP1R35Q8TAP8 253 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 GNG12Q9UBI6 72 aa15.19■□□□□ 0.02
SMAD3-201ENST00000327367 SHPRHQ149N8 1683 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms