RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ODF4Q2M2E3 257 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 TMEM44Q2T9K0 475 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ULK3Q6PHR2 472 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 EIF4E3Q8N5X7 224 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 LINC00469Q8N7U9 141 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF524Q96C55 264 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 MESP1Q9BRJ9 268 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 SEMA4CQ9C0C4 833 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 CLDN16Q9Y5I7 305 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 SERINC4A6NH21 518 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 SIGLEC6O43699 453 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 RPP14O95059 124 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ITPKBP27987 946 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ADH7P40394 386 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 AQP2P41181 271 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 DCAF12L2Q5VW00 463 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 TMEM88Q6PEY1 159 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 CDH26Q8IXH8 852 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF671Q8TAW3 534 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 SNX33Q8WV41 574 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 FANCFQ9NPI8 374 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ANKRD10Q9NXR5 420 aa14.13□□□□□ -0.15
SHROOM1-201ENST00000319854 ANKRD61A6NGH8 418 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 VSIG10L2P0DP72 767 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 CLDN12P56749 244 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 RPS15P62841 145 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 IGSF11Q5DX21 431 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF626Q68DY1 528 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 SYT13Q7L8C5 426 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF511Q8NB15 262 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 STK35Q8TDR2 534 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 THAP3Q8WTV1 239 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF275Q9NSD4 429 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 COA4Q9NYJ1 87 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 OPN4Q9UHM6 478 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 CYB5R1Q9UHQ9 305 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ELOA3DA6NLF2 546 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 SRPX2O60687 465 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 CPN1P15169 458 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 HOXA1P49639 335 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 SERTAD2Q14140 314 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ELOA3BQ3SY89 546 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 FAM69AQ5T7M9 428 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 HES5Q5TA89 166 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 DMKNQ6E0U4 476 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 OR6V1Q8N148 313 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ARHGEF39Q8N4T4 335 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 BPIFCQ8NFQ6 507 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ELOA3Q8NG57 546 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 OR8K3Q8NH51 312 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF563Q8TA94 476 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 Q96M85 177 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 GINS4Q9BRT9 223 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 SRA1Q9HD15 236 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 C14orf105Q9NVL8 296 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 TAS2R5Q9NYW4 299 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 PURGQ9UJV8 347 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 LHX6Q9UPM6 363 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 CTDSPLO15194 276 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 CREBL2O60519 120 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 IFNGP01579 166 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 FAM199XQ6PEV8 388 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 C16orf47Q6ZP98 133 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 GKN2Q86XP6 184 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF595Q8IYB9 648 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 WNT2BQ93097 391 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 MOGAT1Q96PD6 335 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 NKX6-2Q9C056 277 aaPredicted RBP14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 ABRACLQ9P1F3 81 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 PLCL2Q9UPR0 1127 aa14.12□□□□□ -0.15
SHROOM1-201ENST00000319854 LRP4O75096 1905 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 ARPC4-TTLL3A0A0A6YYG9 625 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 MPTX1A8MV57 137 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 FMO6PO60774 539 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 KHDRBS3O75525 346 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 NDUFB2O95178 105 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF35P13682 527 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 EXOSC6Q5RKV6 272 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 LMF2Q9BU23 707 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 RTN4RQ9BZR6 473 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 FBXL21Q9UKT6 434 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 IGHV3-20A0A0C4DH32 117 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 OR6C68A6NDL8 312 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 PYCARD-AS1I3L0S3 204 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 FLRT2O43155 660 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 NSA2O95478 260 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 GPANK1O95872 356 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 MC2RQ01718 297 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 FHL1Q13642 323 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 ELP2Q6IA86 826 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 ZNF550Q7Z398 422 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 NAXDQ8IW45 347 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 PNPLA2Q96AD5 504 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 SLC25A38Q96DW6 304 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 OR14A2Q96R54 314 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 GFI1Q99684 422 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 ADAT1Q9BUB4 502 aaKnown RBP14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 G6PC3Q9BUM1 346 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 MOKQ9UQ07 419 aa14.11□□□□□ -0.15
SHROOM1-201ENST00000319854 SLC6A5Q9Y345 797 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms