RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 OR4E2Q8NGC2 313 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NANPQ8TBE9 248 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NT5CQ8TCD5 201 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RSC1A1Q92681 617 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MCHR2Q969V1 340 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 GFI1Q99684 422 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 TLNRD1Q9H1K6 362 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 WDR76Q9H967 626 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 Q9N2J8 555 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 METTL1Q9UBP6 276 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LAMP5Q9UJQ1 280 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 TRAV14DV4A0A0A6YYC5 116 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF729A6NN14 1252 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 HTR3BO95264 441 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DUS4LO95620 317 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ACAA1P09110 424 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 OR8G3PP0DMU2 310 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ALOX5APP20292 161 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 VAMP1P23763 118 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PBX2P40425 430 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 FCRLBQ6BAA4 426 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LRRTM1Q86UE6 522 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 OR51L1Q8NGJ5 315 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LIPHQ8WWY8 451 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RGP1Q92546 391 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ARRDC3Q96B67 414 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 INSM2Q96T92 566 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MICU1Q9BPX6 476 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SEMA6CQ9H3T2 930 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LPAR3Q9UBY5 353 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SYNDIG1LA6NDD5 238 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MFNGO00587 321 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ABHD16AO95870 558 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 INHAP05111 366 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CHRM2P08172 466 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZBTB25P24278 435 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SLC6A9P48067 706 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NTHL1P78549 312 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DNLZQ5SXM8 178 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM88Q6PEY1 159 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ARRDC1Q8N5I2 433 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 WDSUB1Q8N9V3 476 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 KREMEN2Q8NCW0 462 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 OR1J1Q8NGS3 322 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 GRHL3Q8TE85 626 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SUSD6Q92537 303 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZDHHC12Q96GR4 267 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CHRDQ9H2X0 955 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PPP4R1LQ9P1A2 415 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 APOBEC3BQ9UH17 382 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 HHLA2Q9UM44 414 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 HIF3AQ9Y2N7 669 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PRKAB1Q9Y478 270 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 TIMM10BQ9Y5J6 103 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MEX3AA1L020 520 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RHPN2P1A8MT19 583 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 GMFGO60234 142 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RPP14O95059 124 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 KAT7O95251 611 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MAS1P04201 325 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 FSTP19883 344 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CD1CP29017 333 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 EIF2S3P41091 472 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PPICP45877 212 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SNRPEP62304 92 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RAB1AP62820 205 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SIM1P81133 766 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LINC01590Q5TEZ4 76 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PAPD4Q6PIY7 484 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LINC00114Q6XXX2 140 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MAMSTRQ6ZN01 415 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LINC01555Q8NAE3 123 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DTWD2Q8NBA8 298 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NPEPL1Q8NDH3 523 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LCN9Q8WX39 176 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 FAM46BQ96A09 425 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PRMT8Q9NR22 394 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DEC1Q9P2X7 70 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SULT2B1O00204 365 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 UPK3AO75631 287 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DCNP07585 359 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ADH7P40394 386 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NANOS3P60323 173 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CDK3Q00526 305 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 KIR2DS3Q14952 304 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 FAM166AQ6J272 317 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 C12orf40Q86WS4 652 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ING5Q8WYH8 240 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF75AQ96N20 296 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF285Q96NJ3 590 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 INTS14Q96SY0 518 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NUDT16L1Q9BRJ7 211 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 WDR13Q9H1Z4 485 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SMDT1Q9H4I9 107 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RHOFQ9HBH0 211 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 USP36Q9P275 1121 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 A0A087WUJ7 227 aa4.34□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM72A0PK05 275 aa4.34□□□□□ -1.71
PTPN13-201ENST00000316707 C5orf51A6NDU8 294 aa4.34□□□□□ -1.71
PTPN13-201ENST00000316707 IGLON5A6NGN9 336 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms