RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 CREB3L2Q70SY1 520 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 CXXC5Q7LFL8 322 aaKnown RBP14.36□□□□□ -0.11
TUBB3-201ENST00000315491 BCDIN3DQ7Z5W3 292 aaKnown RBP14.36□□□□□ -0.11
TUBB3-201ENST00000315491 ADCK1Q86TW2 530 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 NPEPL1Q8NDH3 523 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 OR6Q1Q8NGQ2 317 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 LILRB4Q8NHJ6 448 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 ABHD3Q8WU67 409 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 LRR1Q96L50 414 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 NMNAT3Q96T66 252 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 ZNF175Q9Y473 711 aa14.36□□□□□ -0.11
TUBB3-201ENST00000315491 FAM183AA6NL82 134 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 PRR23D1E9PI22 279 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-201ENST00000315491 ARHGEF9O43307 516 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 AQP8O94778 261 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 GABARAPO95166 117 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 PRR23D2P0DMB1 279 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-201ENST00000315491 FMO3P31513 532 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 SLC16A1P53985 500 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 BIDP55957 195 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 CLDN17P56750 224 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 CTF1Q16619 201 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 DGUOKQ16854 277 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 MEDAGQ5VYS4 303 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 PLBD1Q6P4A8 553 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 ADGRE4PQ86SQ3 457 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 AKAP14Q86UN6 197 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 CPOQ8IVL8 374 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 CYB561A3Q8NBI2 242 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 OTULINQ96BN8 352 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 ZNF486Q96H40 463 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-201ENST00000315491 Q96MT0 163 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 DDOQ99489 341 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 EMC6Q9BV81 110 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 DNAJC27Q9NZQ0 273 aa14.35□□□□□ -0.11
TUBB3-201ENST00000315491 RBMX2Q9Y388 322 aaKnown RBP14.35□□□□□ -0.11
TUBB3-201ENST00000315491 SLC22A20A6NK97 555 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 TTLL8A6PVC2 850 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 AHRRA9YTQ3 701 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 KDM4EB2RXH2 506 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ENTPD6O75354 484 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 RENP00797 406 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 PAICSP22234 425 aaKnown RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 RUNX1T1Q06455 604 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 SMN1Q16637 294 aaKnown RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 AADACL4Q5VUY2 407 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 HDDC2Q7Z4H3 204 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ADAD1Q96M93 576 aaKnown RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ZNF582Q96NG8 517 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ZNF385AQ96PM9 386 aaKnown RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 SNX18Q96RF0 628 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 TRIB1Q96RU8 372 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 KLHL9Q9P2J3 617 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ING1Q9UK53 422 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 FLVCR1Q9Y5Y0 555 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ACACBO00763 2458 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 DNAJC13O75165 2243 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 IGKV3D-15A0A087WSY6 115 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 SLC35F4A4IF30 521 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 OR6C68A6NDL8 312 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ZNF726A6NNF4 738 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 H7C1C5 153 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 TGM6O95932 706 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 BMP4P12644 408 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 CXCR4P61073 352 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 LCN6P62502 163 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 RNPS1Q15287 305 aaKnown RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 NXNL2Q5VZ03 156 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ZNF585AQ6P3V2 769 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 PRSS48Q7RTY5 328 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 WDFY1Q8IWB7 410 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 ZIC4Q8N9L1 334 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 BBS1Q8NFJ9 593 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 OR6X1Q8NH79 312 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 PTP4A1Q93096 173 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 HCAR1Q9BXC0 346 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 MED20Q9H944 212 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 H2AFY2Q9P0M6 372 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-201ENST00000315491 CLCF1Q9UBD9 225 aa14.34□□□□□ -0.11
TUBB3-201ENST00000315491 BSNQ9UPA5 3926 aa14.33□□□□□ -0.11
TUBB3-201ENST00000315491 PRSS37A4D1T9 235 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 SH3D21A4FU49 640 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 M0R3G1 203 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 SLC1A7O00341 560 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 AKAP8O43823 692 aaKnown RBP14.33□□□□□ -0.12
TUBB3-201ENST00000315491 TPOP07202 933 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 FCGR2AP12318 317 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 CD40LGP29965 261 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 NUDT6P53370 316 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 ACSF3Q4G176 576 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-201ENST00000315491 GFRALQ6UXV0 394 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 VASH1Q7L8A9 365 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-201ENST00000315491 P4HA3Q7Z4N8 544 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 GID4Q8IVV7 300 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 MCEMP1Q8IX19 187 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 FAM57AQ8TBR7 257 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 KCNK17Q96T54 332 aa14.33□□□□□ -0.12
TUBB3-201ENST00000315491 VSX1Q9NZR4 365 aaPredicted RBP14.33□□□□□ -0.12
TUBB3-201ENST00000315491 WARS2Q9UGM6 360 aaKnown RBP14.33□□□□□ -0.12
TUBB3-201ENST00000315491 PCDHGB1Q9Y5G3 927 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms