RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 GTF2F2P13984 249 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 RPS27P42677 84 aaKnown RBP12.21□□□□□ -0.46
SKA3-202ENST00000314759 SERTAD2Q14140 314 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 GPR18Q14330 331 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 NPSR1Q6W5P4 371 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 FAM122BQ7Z309 247 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 JAZF1Q86VZ6 243 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 ZNF595Q8IYB9 648 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 OR2G2Q8NGZ5 317 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 ASB12Q8WXK4 309 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 DVL3Q92997 716 aaPredicted RBP12.21□□□□□ -0.46
SKA3-202ENST00000314759 VSTM2LQ96N03 204 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 KCNK15Q9H427 330 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 ZMAT5Q9UDW3 170 aaKnown RBP12.21□□□□□ -0.46
SKA3-202ENST00000314759 LHX6Q9UPM6 363 aa12.21□□□□□ -0.46
SKA3-202ENST00000314759 ARHGEF17Q96PE2 2063 aaPredicted RBP12.2□□□□□ -0.46
SKA3-202ENST00000314759 TRAV14DV4A0A0A6YYC5 116 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 TVP23AA6NH52 213 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 EFCAB7A8K855 629 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 GPR31O00270 319 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 SMAD9O15198 467 aaKnown RBP12.2□□□□□ -0.46
SKA3-202ENST00000314759 CD3DP04234 171 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 RPA2P15927 270 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 HOXA1P49639 335 aaPredicted RBP12.2□□□□□ -0.46
SKA3-202ENST00000314759 AKR1C2P52895 323 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 AKR1C1Q04828 323 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 C4orf46Q504U0 113 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 NKAIN2Q5VXU1 208 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 C11orf88Q6PI97 169 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 CDC20BQ86Y33 519 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 OR8S1Q8NH09 359 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 RBM18Q96H35 190 aaKnown RBP12.2□□□□□ -0.46
SKA3-202ENST00000314759 APMAPQ9HDC9 416 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 IKZF2Q9UKS7 526 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 PCOLCE2Q9UKZ9 415 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 TRAV18A0A075B6X5 111 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 HCRTR1O43613 425 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 EIF4E2O60573 245 aaKnown RBP12.2□□□□□ -0.46
SKA3-202ENST00000314759 RDH16O75452 317 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 FCARP24071 287 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 CSF2RBP32927 897 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 SLC25A1P53007 311 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 MPPED2Q15777 294 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 ZNF776Q68DI1 518 aaPredicted RBP12.2□□□□□ -0.46
SKA3-202ENST00000314759 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 ZNF417Q8TAU3 575 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 MOGAT1Q96PD6 335 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 DNTTIP1Q9H147 329 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 SLC25A32Q9H2D1 315 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 RASL12Q9NYN1 266 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 MLXQ9UH92 298 aa12.2□□□□□ -0.46
SKA3-202ENST00000314759 H7C1C5 153 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 H7C2Y5 167 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 GUSBP08236 651 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 CD14P08571 375 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 AKAIN1P0CW23 69 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 SEC13P55735 322 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 SCAND1P57086 179 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 LCN6P62502 163 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 BEX5Q5H9J7 111 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 OR5T2Q8NGG2 359 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 BAHD1Q8TBE0 780 aaPredicted RBP12.19□□□□□ -0.46
SKA3-202ENST00000314759 DUSP19Q8WTR2 217 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 RSC1A1Q92681 617 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 EXO5Q9H790 373 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 A6NCN8 305 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 F13BP05160 661 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 ITGA5P08648 1049 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 CTXN1P60606 82 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 DMWDQ09019 674 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 HFEQ30201 348 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 KRT77Q7Z794 578 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.19□□□□□ -0.46
SKA3-202ENST00000314759 PRSS35Q8N3Z0 413 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 CSNK1A1LQ8N752 337 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 LRRC75AQ8NAA5 344 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 TMEM185AQ8NFB2 350 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 MCHR2Q969V1 340 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 COA4Q9NYJ1 87 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 LAMP5Q9UJQ1 280 aa12.19□□□□□ -0.46
SKA3-202ENST00000314759 SERINC4A6NH21 518 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 TGFBR3LH3BV60 316 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 AKR7A3O95154 331 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 RASGRP1O95267 797 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 CTSBP07858 339 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 GRK6P43250 576 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 POU3F4P49335 361 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 GPR85P60893 370 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 HYAL4Q2M3T9 481 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 DPY19L4Q7Z388 723 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 CBLN2Q8IUK8 224 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 C10orf53Q8N6V4 93 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 CLEC1AQ8NC01 280 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 OR9A4Q8NGU2 314 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 GPR148Q8TDV2 347 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 PAWRQ96IZ0 340 aaKnown RBP12.18□□□□□ -0.46
SKA3-202ENST00000314759 WDR76Q9H967 626 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 IL23AQ9NPF7 189 aa12.18□□□□□ -0.46
SKA3-202ENST00000314759 HIF3AQ9Y2N7 669 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms