RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 NABP1Q96AH0 204 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 BPIFA2Q96DR5 249 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 DHRS1Q96LJ7 313 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 SORCS2Q96PQ0 1159 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 KCNK17Q96T54 332 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 REG4Q9BYZ8 158 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 PLK3Q9H4B4 646 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 B3GAT2Q9NPZ5 323 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 INIPQ9NRY2 104 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 DCAF13Q9NV06 445 aaKnown RBP12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 NDUFAF4Q9P032 175 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 POFUT2Q9Y2G5 429 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 ENPP4Q9Y6X5 453 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 TLN2Q9Y4G6 2542 aa12.62□□□□□ -0.39
PPP1CA-201ENST00000312989 SVEP1Q4LDE5 3571 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 NDUFAB1O14561 156 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 SSX4O60224 188 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 BCL10O95999 233 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 IGHG1P01857 330 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 MMP7P09237 267 aaPredicted RBP12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 QDPRP09417 244 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 OR4A8P0C604 315 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 IFI30P13284 250 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 SERPINF1P36955 418 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 LIMS1P48059 325 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 GIPRP48546 466 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 VLDLRP98155 873 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 PIGFQ07326 219 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 TRAM2Q15035 370 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 NRN1LQ496H8 165 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 CPLX4Q7Z7G2 160 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF525Q8N782 197 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 CLDN22Q8N7P3 220 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 OR4F15Q8NGB8 312 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF519Q8TB69 540 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 SLC7A13Q8TCU3 470 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 FBXO17Q96EF6 278 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 DOK1Q99704 481 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 NSRP1Q9H0G5 558 aaKnown RBP12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 NMNAT1Q9HAN9 279 aaPredicted RBP12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 BARX1Q9HBU1 254 aaPredicted RBP12.61□□□□□ -0.39
PPP1CA-201ENST00000312989 CUBNO60494 3623 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 TRAV27A0A087WT01 109 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 HTR3EA5X5Y0 456 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 GPRIN2O60269 458 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 SLC2A10O95528 541 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 HIST1H2ABP04908 130 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 CD79AP11912 226 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 HSD17B1P14061 328 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 ACADSP16219 412 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 FXYD6P3P58550 94 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 RAB1AP62820 205 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 MYBPC1Q00872 1141 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 FMODQ06828 376 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 GLYATQ6IB77 296 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 TMPRSS11FQ6ZWK6 438 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 MBOAT2Q6ZWT7 520 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 HIST3H2AQ7L7L0 130 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 PGAM4Q8N0Y7 254 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 ANKS4BQ8N8V4 417 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 OR13C2Q8NGS9 318 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 HIST1H2ACQ93077 130 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 FAM162AQ96A26 154 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 TSPAN32Q96QS1 320 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 TNFRSF13CQ96RJ3 184 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 ANKRD19PQ9H560 264 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 GORASP2Q9H8Y8 452 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 ARL2BPQ9Y2Y0 163 aa12.6□□□□□ -0.39
PPP1CA-201ENST00000312989 A0A1W2PRG6 482 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 A0A1W2PRQ8 180 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 FAM171A2A8MVW0 826 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 VWC2LB2RUY7 222 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 NR4A1P22736 598 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 CAPZA2P47755 286 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 PTDSS1P48651 473 aaKnown RBP12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 DAP3P51398 398 aaKnown RBP12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 EFNA4P52798 201 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 DGCR6Q14129 220 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 RAB39AQ14964 217 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 SEC23BQ15437 767 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 SLC25A47Q6Q0C1 308 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 VHLLQ6RSH7 139 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 FOXL2NBQ6ZUU3 175 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 FAM122BQ7Z309 247 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 IGFN1Q86VF2 1251 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 RNF113BQ8IZP6 322 aaKnown RBP12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 PAQR4Q8N4S7 273 aaPredicted RBP12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 FITM2Q8N6M3 262 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 SYT14Q8NB59 555 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 OR4K5Q8NGD3 323 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 C10orf105Q8TEF2 133 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 GPA33Q99795 319 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 FNDC11Q9BVV2 318 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 DENND2DQ9H6A0 471 aaPredicted RBP12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 FAM53CQ9NYF3 392 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
PPP1CA-201ENST00000312989 ZNF346Q9UL40 294 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms