RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 OR51G2Q8NGK0 314 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ELSPBP1Q96BH3 223 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 NXF2Q9GZY0 626 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 REV1Q9UBZ9 1251 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 VDAC3Q9Y277 283 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ASB1Q9Y576 335 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 A0A1B0GX78 115 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 KRBA1A5PL33 1030 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PPP1R17O96001 155 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 OR4E1P0C645 316 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 MTHFD2P13995 350 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ZP3P21754 424 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 FOXO1Q12778 655 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PGGHGQ32M88 737 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ZNF106Q9H2Y7 1883 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 SLC5A6Q9Y289 635 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 FAM189BP81408 668 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 MADCAM1Q13477 382 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 C21orf62-AS1Q17RA5 79 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 MICU1Q9BPX6 476 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 TRAPPC2LH3BP13 241 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PMP2P02689 132 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 HIST1H1BP16401 226 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 BTF3P20290 206 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 YBX1P67809 324 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 DEFB128Q7Z7B8 93 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ZBTB46Q86UZ6 589 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ADPRHL1Q8NDY3 354 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PLPP5Q8NEB5 264 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 FAM83FQ8NEG4 500 aaPredicted RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 OR13C4Q8NGS5 318 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 KLF16Q9BXK1 252 aaPredicted RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 GP6Q9HCN6 339 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 CLEC4EQ9ULY5 219 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 RLFQ13129 1914 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 NGFRP08138 427 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 SMIM6P0DI80 62 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 FOXK2Q01167 660 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 FGL2Q14314 439 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ARL14EPQ8N8R7 260 aaPredicted RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 UTP4Q969X6 686 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 LMLNQ96KR4 655 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 NDFIP1Q9BT67 221 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 MS4A8Q9BY19 250 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 TREM1Q9NP99 234 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 NUMBLQ9Y6R0 609 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PRSS38A1L453 326 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 J3QLW9 94 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 JMJD7P0C870 316 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ZNF19P17023 458 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 CD22P20273 847 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ELK4P28324 431 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PRDX3P30048 256 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 MRPL21Q7Z2W9 205 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 C3orf58Q8NDZ4 430 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 OR7D4Q8NG98 312 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 LRRC3BQ96PB8 259 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 SF3B5Q9BWJ5 86 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 TBX21Q9UL17 535 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 A0A1W2PRU2 124 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 CHRM4P08173 479 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 COX5AP20674 150 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 SLC6A11P48066 632 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ZNF85Q03923 595 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 AADACL4Q5VUY2 407 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 OR10J5Q8NHC4 309 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ASB5Q8WWX0 329 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PGAM5Q96HS1 289 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ZNF700Q9H0M5 742 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 METTL9Q9H1A3 318 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ERVMER34-1Q9H9K5 563 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 NEU3Q9UQ49 428 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 LOC105369274A0A096LPK9 316 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 IDSB3KWA1 339 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 INHAP05111 366 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 GCH1P30793 250 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 PMELP40967 661 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 NUBP1P53384 320 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 ADARB1P78563 741 aaKnown RBP3.71□□□□□ -1.82
USH2A-201ENST00000307340 SERF2P84101 59 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 C17orf99Q6UX52 265 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 OR4N4Q8N0Y3 316 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 POGLUT1Q8NBL1 392 aa3.71□□□□□ -1.82
USH2A-201ENST00000307340 CCDC163A0A0D9SF12 145 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 RPS10-NUDT3A0A1W2PQS6 291 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A10PA6NDY2 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A18PA6NE21 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A16PA6NEW6 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A20PA6NIJ5 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A8PA6NJQ4 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A7PA6NKC0 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A22PA8MWA6 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A12PA8MX19 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A5PA8MXJ8 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A23PA8MXZ1 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 ENPP3O14638 875 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 PRSS23O95084 383 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 GJB5O95377 273 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A15PP0C7V4 464 aa3.7□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A13PP0C7W8 464 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms