RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 WNT6Q9Y6F9 365 aa9.89□□□□□ -0.83
ZNF558-201ENST00000301475 RAB3DO95716 219 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ABHD16AO95870 558 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 HLA-AP01891 365 aaKnown RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 AMY2AP04746 511 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 HEXAP06865 529 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 HAAOP46952 286 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 MNX1P50219 401 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PRRT3Q5FWE3 981 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ALG10BQ5I7T1 473 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PGAP1Q75T13 922 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 OR5AP2Q8NGF4 316 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 FBXO17Q96EF6 278 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ULBP3Q9BZM4 244 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 NIT2Q9NQR4 276 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 FAM96BQ9Y3D0 163 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ARID1BQ8NFD5 2236 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 TRBV5-7A0A0A0MS05 114 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 TRBV23-1A0A0A0MS06 115 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 COLCA2A8K830 154 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 TO15178 435 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 NDUFS6O75380 124 aaKnown RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF735P0CB33 412 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ADRB3P13945 408 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 RPL4P36578 427 aaKnown RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 EMDP50402 254 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 GTPBP8Q8N3Z3 284 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 OR2L3Q8NG85 312 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 OR13C8Q8NGS7 320 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ARL11Q969Q4 196 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 NXPE3Q969Y0 559 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 CPNE2Q96FN4 548 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 LRFN5Q96NI6 719 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 GAL3ST1Q99999 423 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ALG12Q9BV10 488 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 POTEKPQ9BYX7 375 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 TREM1Q9NP99 234 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 UQCC1Q9NVA1 299 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PLEKHA6Q9Y2H5 1048 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 HCFC2Q9Y5Z7 792 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 OR52A4PA6NMU1 304 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 OR4C45A6NMZ5 311 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PCCBP05166 539 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 CD79AP11912 226 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PSMD4P55036 377 aaKnown RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ECH1Q13011 328 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 FHL5Q5TD97 284 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 LPCAT3Q6P1A2 487 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF704Q6ZNC4 412 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 ERN2Q76MJ5 926 aaKnown RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 SLC39A11Q8N1S5 342 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PAQR4Q8N4S7 273 aaPredicted RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 SLC22A8Q8TCC7 542 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 PHOSPHO1Q8TCT1 267 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 MRPL48Q96GC5 212 aaKnown RBP9.88□□□□□ -0.83
ZNF558-201ENST00000301475 SEC11CQ9BY50 192 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM100Q9NV29 134 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 UPB1Q9UBR1 384 aa9.88□□□□□ -0.83
ZNF558-201ENST00000301475 NOTCH4Q99466 2003 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 FARS2O95363 451 aaKnown RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 LRG1P02750 347 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF888P0CJ79 500 aaPredicted RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 RPS27P42677 84 aaKnown RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ACAA2P42765 397 aaKnown RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 GPR143P51810 404 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 TAS2R19P59542 299 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 CDK3Q00526 305 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF234Q14588 700 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 EXOSC6Q5RKV6 272 aaKnown RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ARHGAP40Q5TG30 622 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ZCCHC12Q6PEW1 402 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 VN1R4Q7Z5H5 301 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 MISPQ8IVT2 679 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 TMED6Q8WW62 240 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 EDARADDQ8WWZ3 215 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 TCEAL3Q969E4 200 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 SEH1LQ96EE3 360 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 PIK3IP1Q96FE7 263 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 CNTNAP3BQ96NU0 1288 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 RXFP3Q9NSD7 469 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 VSIG4Q9Y279 399 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 YBX2Q9Y2T7 364 aaKnown RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 C5orf52A6NGY3 159 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 FAM25EA8MYX2 175 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 RAD1O60671 282 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 GLCEO94923 617 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 PGAM2P15259 253 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 SCAND1P57086 179 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ACTBP60709 375 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ACTG1P63261 375 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 DMWDQ09019 674 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 EXOSC7Q15024 291 aaKnown RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 MST1LQ2TV78 715 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 GFOD2Q3B7J2 385 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 C2orf76Q3KRA6 126 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 SLC35D3Q5M8T2 416 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 PRAMEF17Q5VTA0 474 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM205Q6UW68 189 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms