RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 NPIPA5E9PKD4 350 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ALOX5APP20292 161 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 SIGLEC14Q08ET2 396 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 AGAP6Q5VW22 663 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 PLET1Q6UQ28 207 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 HGDQ93099 445 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 LRFN5Q96NI6 719 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 AGAP4Q96P64 663 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 CCNL2Q96S94 520 aaPredicted RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 CENPMQ9NSP4 180 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 MRPL22Q9NWU5 206 aaKnown RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 SLC39A1Q9NY26 324 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 NPIPA1Q9UND3 350 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 LYRM1O43325 122 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 APEHP13798 732 aaKnown RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 IL10RAQ13651 578 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ALKBH1Q13686 389 aaKnown RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 TRAM1Q15629 374 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 TSEN15Q8WW01 171 aaKnown RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 THAP7Q9BT49 309 aaPredicted RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 TXNIPQ9H3M7 391 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 KCNK15Q9H427 330 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ZNF160Q9HCG1 818 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 SLC22A23A1A5C7 686 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 TRABD2BA6NFA1 517 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ANKUB1A6NFN9 424 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 NOTOA8MTQ0 251 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 MS4A18H0YCH9 400 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 SLC19A2O60779 497 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 CER1O95813 267 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 TACSTD2P09758 323 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 DGCR2P98153 550 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ASAH1Q13510 395 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ISXQ2M1V0 245 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 MS4A18Q3C1V0 323 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 FCRLAQ7L513 359 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 NUP54Q7Z3B4 507 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 LRRC28Q86X40 367 aaPredicted RBP13.1□□□□□ -0.31
SMG8-201ENST00000300917 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 GNRHR2Q96P88 292 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 GFI1Q99684 422 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 NDEL1Q9GZM8 345 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 TCF7L1Q9HCS4 588 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 CYSLTR2Q9NS75 346 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 FBXL3Q9UKT7 428 aa13.1□□□□□ -0.31
SMG8-201ENST00000300917 ADAMTS20P59510 1910 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 TRAV8-7A0A075B6U6 113 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 A0A0B4J293 547 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 TXNDC12O95881 172 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 UMODP07911 640 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 UCHL1P09936 223 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 OTX2P32243 289 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 HTR3AP46098 478 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 PITPNBP48739 271 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 CD83Q01151 205 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 CAMK2DQ13557 499 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 EIF2B1Q14232 305 aaKnown RBP13.09□□□□□ -0.31
SMG8-201ENST00000300917 MRPL14Q6P1L8 145 aaKnown RBP13.09□□□□□ -0.31
SMG8-201ENST00000300917 KRT77Q7Z794 578 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 OR4K17Q8NGC6 315 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 OR2G2Q8NGZ5 317 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 SETD6Q8TBK2 473 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 TMEM106AQ96A25 262 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 MRPL48Q96GC5 212 aaKnown RBP13.09□□□□□ -0.31
SMG8-201ENST00000300917 MAP6Q96JE9 813 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 C19orf25Q9UFG5 118 aaPredicted RBP13.09□□□□□ -0.31
SMG8-201ENST00000300917 EML6Q6ZMW3 1958 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 TRAV6A0A075B6T7 132 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 RAMP1O60894 148 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 PNPP00491 289 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 MT-ATP6P00846 226 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 BIDP55957 195 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 MYBPHQ13203 477 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 TMPRSS12Q86WS5 348 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 UBQLNLQ8IYU4 475 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 PRSS35Q8N3Z0 413 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 ACOT12Q8WYK0 555 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 ZNF775Q96BV0 537 aaPredicted RBP13.09□□□□□ -0.31
SMG8-201ENST00000300917 SOSTQ9BQB4 213 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 AUNIPQ9H7T9 357 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 BEX1Q9HBH7 125 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 MYEF2Q9P2K5 600 aaKnown RBP13.09□□□□□ -0.31
SMG8-201ENST00000300917 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
SMG8-201ENST00000300917 DXOO77932 396 aaKnown RBP13.08□□□□□ -0.31
SMG8-201ENST00000300917 PRKAR1AP10644 381 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 TMEM176BQ3YBM2 270 aaPredicted RBP13.08□□□□□ -0.31
SMG8-201ENST00000300917 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 WDR38Q5JTN6 314 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 ZNF684Q5T5D7 378 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 OTOSQ8NHW6 89 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 ABCG5Q9H222 651 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 CDCP1Q9H5V8 836 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 WIF1Q9Y5W5 379 aa13.08□□□□□ -0.31
SMG8-201ENST00000300917 PHF3Q92576 2039 aaKnown RBP13.08□□□□□ -0.32
SMG8-201ENST00000300917 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.08□□□□□ -0.32
SMG8-201ENST00000300917 FTCDNL1E5RQL4 147 aa13.08□□□□□ -0.32
SMG8-201ENST00000300917 OR2T1O43869 369 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms