RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 COA3Q9Y2R0 106 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 A0A0C4DFX4 3053 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 SHISA8B8ZZ34 492 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 UTS2O95399 124 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 F10P00742 488 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 HEXBP07686 556 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 FBLP22087 321 aaKnown RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 LBX1P52954 281 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 SMUG1Q53HV7 270 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 FAM209AQ5JX71 171 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 WBP2NLQ6ICG8 309 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 RNF165Q6ZSG1 346 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 RASGRP3Q8IV61 690 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 PNLDC1Q8NA58 520 aaKnown RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 HHIPL1Q96JK4 782 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 RBM24Q9BX46 236 aaKnown RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 INPP5EQ9NRR6 644 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 C2orf42Q9NWW7 574 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 MED29Q9NX70 200 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 GPRIN2O60269 458 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 DPM1O60762 260 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 ZNF41P51814 821 aaPredicted RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 RPL18Q07020 188 aaKnown RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 TMEM240Q5SV17 173 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 TCTE3Q8IZS6 198 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 ZSCAN1Q8NBB4 408 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 STOML3Q8TAV4 291 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 MEPEQ9NQ76 525 aaPredicted RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 DIO1P49895 249 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 BTG1P62324 171 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 CSNK2A1P68400 391 aaPredicted RBP12.15□□□□□ -0.46
CASC4-201ENST00000299957 BAMBIQ13145 260 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 KRBOX4Q5JUW0 171 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 SIGIRRQ6IA17 410 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 STAC2Q6ZMT1 411 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 CSNK2A3Q8NEV1 391 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 ZPLD1Q8TCW7 415 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 PGAM5Q96HS1 289 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 PPP1R3EQ9H7J1 279 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 TAS2R4Q9NYW5 299 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 HHLA2Q9UM44 414 aa12.15□□□□□ -0.46
CASC4-201ENST00000299957 PAPPA2Q9BXP8 1791 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 ZNF208O43345 1280 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 PMP2P02689 132 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 PRSS12P56730 875 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 MDGA2Q7Z553 956 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 ZFP82Q8N141 532 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 OR6V1Q8N148 313 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 YIPF5Q969M3 257 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 CMBLQ96DG6 245 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 ZC3H10Q96K80 434 aaKnown RBP12.14□□□□□ -0.47
CASC4-201ENST00000299957 ADGRL4Q9HBW9 690 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 TAS2R8Q9NYW2 309 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 A0A0B4J293 547 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 TMEM229AB2RXF0 380 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 PRAF2O60831 178 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 SLC35E2P0CK97 266 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 SLC6A1P30531 599 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 CTHP32929 405 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 RBMXP38159 391 aaKnown RBP12.14□□□□□ -0.47
CASC4-201ENST00000299957 NPY4RP50391 375 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 ELOCQ15369 112 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 CHRFAM7AQ494W8 412 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 SLC36A2Q495M3 483 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 TRAPPC6BQ86SZ2 158 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
CASC4-201ENST00000299957 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 ST8SIA4Q92187 359 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 MOGAT1Q96PD6 335 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 ARHGDIGQ99819 225 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 MED18Q9BUE0 208 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 PRRG4Q9BZD6 226 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 POFUT1Q9H488 388 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 PPP4R1LQ9P1A2 415 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 TLX3O43711 291 aaPredicted RBP12.14□□□□□ -0.47
CASC4-201ENST00000299957 GALR3O60755 368 aaPredicted RBP12.14□□□□□ -0.47
CASC4-201ENST00000299957 LILRB5O75023 590 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 SCGNO76038 276 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 GLCEO94923 617 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 TMEM225BP0DP42 221 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 GABRR1P24046 479 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 HTR2CP28335 458 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 EMP2P54851 167 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 RAB38P57729 211 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 C9orf50Q5SZB4 431 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 SLC41A2Q96JW4 573 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 EIF5A2Q9GZV4 153 aaKnown RBP12.14□□□□□ -0.47
CASC4-201ENST00000299957 PPA2Q9H2U2 334 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 SERINC1Q9NRX5 453 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 CD207Q9UJ71 328 aa12.14□□□□□ -0.47
CASC4-201ENST00000299957 CCDC85CA6NKD9 419 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 B8ZZF3 427 aa12.13□□□□□ -0.47
CASC4-201ENST00000299957 SDCBPO00560 298 aaPredicted RBP12.13□□□□□ -0.47
CASC4-201ENST00000299957 CSF1P09603 554 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms