RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 WNT7BP56706 349 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 OR10A3P58181 314 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ARL16Q0P5N6 197 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ALKBH1Q13686 389 aaKnown RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CRMP1Q14194 572 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 MAMDC4Q6UXC1 1216 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 SHISA6Q6ZSJ9 500 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 MAVSQ7Z434 540 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 LSMEM1Q8N8F7 131 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CHST11Q9NPF2 352 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CDC14CA4D256 554 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 MTHFD2P13995 350 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF17P17021 662 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CCR7P32248 378 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 HTR3AP46098 478 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 CTSL3PQ5NE16 218 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 FAM74A1Q5RGS3 127 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ADGRE4PQ86SQ3 457 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 RNF113BQ8IZP6 322 aaKnown RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 SLC22A24Q8N4F4 322 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 ARHGDIGQ99819 225 aa13.74□□□□□ -0.21
SCN3B-201ENST00000299333 LYRM2Q9NU23 88 aaPredicted RBP13.74□□□□□ -0.21
SCN3B-201ENST00000299333 SYT5O00445 386 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 HNRNPA2B1P22626 353 aaKnown RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ITGB7P26010 798 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 GABRA4P48169 554 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF140P52738 457 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 FOXK2Q01167 660 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF684Q5T5D7 378 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 C9orf135Q5VTT2 229 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 TOMM20LQ6UXN7 152 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 OR5L1Q8NGL2 311 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 NUDT16L1Q9BRJ7 211 aaKnown RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ABHD6Q9BV23 337 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ELOVL1Q9BW60 279 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ENKD1Q9H0I2 346 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 F2P00734 622 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A6P0DMU7 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A5P0DMU8 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A7P0DMV0 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A8P0DMV1 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A9P0DMV2 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 LTB4RQ15722 352 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A2Q5DJT8 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A1Q5HYN5 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 LGI3Q8N145 548 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 OR52I2Q8NH67 350 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CT45A3Q8NHU0 189 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 SLC17A9Q9BYT1 436 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 AMBRA1Q9C0C7 1298 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 WDR76Q9H967 626 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF320A2RRD8 509 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 MMP7P09237 267 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 TGFBR1P36897 503 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 GP2P55259 537 aaKnown RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 H3F3AP84243 136 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 DGCR2P98153 550 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 KDM4DQ6B0I6 523 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 PLXDC1Q8IUK5 500 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 KIAA1958Q8N8K9 716 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CMTM2Q8TAZ6 248 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 PTDSS2Q9BVG9 487 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ULBP2Q9BZM5 246 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 MOKQ9UQ07 419 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 SETD1AO15047 1707 aaKnown RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 A0A087X0M5 115 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 A0A1B0GX30 115 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 TMEM221A6NGB7 291 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 PTAFRP25105 342 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ARNTP27540 789 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 PSMB5P28074 263 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 HTR5AP47898 357 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ABLIM2Q6H8Q1 611 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ACOT7LQ6ZUV0 252 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 TMEM43Q9BTV4 400 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 HAPLN2Q9GZV7 340 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 FITM1A5D6W6 292 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF727A8MUV8 499 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 G3V3Q6 166 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 GFRA2O00451 464 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 GABRB1P18505 474 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ZNF93P35789 620 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 AKR1C3P42330 323 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ARFGAP1Q8N6T3 406 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 ZFP62Q8NB50 900 aaPredicted RBP13.73□□□□□ -0.21
SCN3B-201ENST00000299333 FGGYQ96C11 551 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 GNG12Q9UBI6 72 aa13.73□□□□□ -0.21
SCN3B-201ENST00000299333 MYH6P13533 1939 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 OR5H14A6NHG9 310 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 RFPL4AA6NLU0 287 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 RFPL4AL1F8VTS6 287 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 MEP1BQ16820 701 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 LBHQ53QV2 105 aaPredicted RBP13.72□□□□□ -0.21
SCN3B-201ENST00000299333 LCN15Q6UWW0 184 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 PPP1R3BQ86XI6 285 aa13.72□□□□□ -0.21
SCN3B-201ENST00000299333 CNTN4Q8IWV2 1026 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms