RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ALG5Q9Y673 324 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 A0A0G2JMP0 313 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 A0A0X1KG70 313 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 NOTOA8MTQ0 251 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 DVL2O14641 736 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 OR7A10O76100 309 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 UCHL1P09936 223 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 CLUP10909 449 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RAB3BP20337 219 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 SLC6A1P30531 599 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 PYCR1P32322 319 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 DIO1P49895 249 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 PRPS1P60891 318 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RPS4XP62701 263 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 ZNF57Q68EA5 555 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 H3F3CQ6NXT2 135 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 SLC35F2Q8IXU6 374 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 CYB561A3Q8NBI2 242 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 FAM98AQ8NCA5 519 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 OR4M2Q8NGB6 313 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 OR10G3Q8NGC4 313 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 HAVCR2Q8TDQ0 301 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 GHSRQ92847 366 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 WACQ9BTA9 647 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 NMNAT2Q9BZQ4 307 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 PPIL3Q9H2H8 161 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 TMEM165Q9HC07 324 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RANGRFQ9HD47 186 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 TEKT2Q9UIF3 430 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 SLC6A5Q9Y345 797 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 WIF1Q9Y5W5 379 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 USP24Q9UPU5 2620 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 DXOO77932 396 aaKnown RBP15.15■□□□□ 0.02
CPSF4-201ENST00000292476 EIF4EP06730 217 aaKnown RBP15.15■□□□□ 0.02
CPSF4-201ENST00000292476 APEHP13798 732 aaKnown RBP15.15■□□□□ 0.02
CPSF4-201ENST00000292476 HIST1H1CP16403 213 aaKnown RBP15.15■□□□□ 0.02
CPSF4-201ENST00000292476 APOBEC1P41238 236 aaKnown RBP15.15■□□□□ 0.02
CPSF4-201ENST00000292476 DLX5P56178 289 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 PITPNAQ00169 270 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 PON3Q15166 354 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 FCRLBQ6BAA4 426 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 SAMD12Q8N8I0 201 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 OR5J2Q8NH18 312 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 TRMT10AQ8TBZ6 339 aaKnown RBP15.15■□□□□ 0.02
CPSF4-201ENST00000292476 RPS4Y2Q8TD47 263 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 UPRTQ96BW1 309 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 HDHD2Q9H0R4 259 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 PTGES2Q9H7Z7 377 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 NRIP3Q9NQ35 241 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 HPF1Q9NWY4 346 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 NLKQ9UBE8 527 aa15.15■□□□□ 0.02
CPSF4-201ENST00000292476 URB1O60287 2271 aaKnown RBP15.14■□□□□ 0.01
CPSF4-201ENST00000292476 EPG5Q9HCE0 2579 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 CDRT15L2A8MXV6 281 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 CDK2AP1O14519 115 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 GNB5O14775 395 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 C1QBP02746 253 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 TFP02787 698 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 HIST1H2ABP04908 130 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 GDI2P50395 445 aaKnown RBP15.14■□□□□ 0.01
CPSF4-201ENST00000292476 ZNF41P51814 821 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-201ENST00000292476 RRAS2P62070 204 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-201ENST00000292476 SIRPAP78324 504 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 HSD17B12Q53GQ0 312 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 HIST3H2AQ7L7L0 130 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 STK35Q8TDR2 534 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 HIST1H2ACQ93077 130 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 NKD1Q969G9 470 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 PELI1Q96FA3 418 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 FER1L6-AS2Q96M78 137 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 DDOQ99489 341 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 C7orf50Q9BRJ6 194 aaKnown RBP15.14■□□□□ 0.01
CPSF4-201ENST00000292476 THAP7Q9BT49 309 aaPredicted RBP15.14■□□□□ 0.01
CPSF4-201ENST00000292476 NANSQ9NR45 359 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 IER3IP1Q9Y5U9 82 aa15.14■□□□□ 0.01
CPSF4-201ENST00000292476 LOC101059948A0A1B0GTJ6 334 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 A8MVM7 634 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 MCIDASD6RGH6 385 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 INMT-MINDY4F8WBC2 141 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 IMPA2O14732 288 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 UBL3O95164 117 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 MT-ATP6P00846 226 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 ARSBP15848 533 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 AHCYP23526 432 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 FKBP2P26885 142 aaKnown RBP15.13■□□□□ 0.01
CPSF4-201ENST00000292476 SLC25A1P53007 311 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 GPR176Q14439 515 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 PLA1AQ53H76 456 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 SLC22A10Q63ZE4 541 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 IL20RBQ6UXL0 311 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 UNQ9370/PRO34162Q6UXP9 181 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 SSX6Q7RTT6 188 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 CDH24Q86UP0 819 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 PLCZ1Q86YW0 608 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 C10orf53Q8N6V4 93 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 NPEPL1Q8NDH3 523 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 SDR9C7Q8NEX9 313 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 OR4K13Q8NH42 304 aa15.13■□□□□ 0.01
CPSF4-201ENST00000292476 GRPEL2Q8TAA5 225 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms