RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 C9orf135Q5VTT2 229 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF836Q6ZNA1 936 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 OPALINQ96PE5 141 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 TEAD3Q99594 435 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 OCSTAMPQ9BR26 566 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 TRAF4Q9BUZ4 470 aaPredicted RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MCOLN1Q9GZU1 580 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF286AQ9HBT8 521 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 ISYNA1Q9NPH2 558 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 CCSO14618 274 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 MSTNO14793 375 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 BCL6P41182 706 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 FOXK1P85037 733 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM176BQ3YBM2 270 aaPredicted RBP15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 ABHD17BQ5VST6 288 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 RTL6Q6ICC9 239 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 AKR7LQ8NHP1 331 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 SGK3Q96BR1 496 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 Q96M85 177 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 METTL9Q9H1A3 318 aa15.17■□□□□ 0.02
SH3RF1-201ENST00000284637 TIMP1P01033 207 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 PMP2P02689 132 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 IRF2P14316 349 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CD53P19397 219 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 DPY19L2P2Q6ZN68 376 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 HSD17B11Q8NBQ5 300 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 OR9K2Q8NGE7 335 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC22A11Q9NSA0 550 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 SUSD2Q9UGT4 822 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 A0A1B0GTL3 188 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 F11P03951 625 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 DGCR2P98153 550 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF595Q8IYB9 648 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM99Q8N816 258 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 RBMXL1Q96E39 390 aaKnown RBP15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 C1orf123Q9NWV4 160 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 GPR55Q9Y2T6 319 aaPredicted RBP15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 GABARAPH6UMI1 98 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CLINT1Q14677 625 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 ACTBL2Q562R1 376 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 MED25Q71SY5 747 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 HHIPQ96QV1 700 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 OR52A5Q9H2C5 316 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CEBPZOSA8MTT3 80 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CD14P08571 375 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CTRB1P17538 263 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CTRB2Q6GPI1 263 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 FRMD1Q8N878 549 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 OR52I2Q8NH67 350 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 NIPSNAP3BQ9BS92 247 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 NKX2-4Q9H2Z4 354 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 CUTCQ9NTM9 273 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 PTRH2Q9Y3E5 179 aaKnown RBP15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 RP1L1Q8IWN7 2480 aaPredicted RBP15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 FITM1A5D6W6 292 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 GALR3O60755 368 aaPredicted RBP15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 SLC2A10O95528 541 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 OR2B8PP59922 312 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 GLCCI1Q86VQ1 547 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 FAM26EQ8N5C1 309 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 OR8D4Q8NGM9 314 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 KCNG3Q8TAE7 436 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 PHYHIPQ92561 330 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 ETV7Q9Y603 341 aa15.16■□□□□ 0.02
SH3RF1-201ENST00000284637 DRD1P21728 446 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 GJA4P35212 333 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 IAH1Q2TAA2 248 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM81Q6P7N7 255 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 FGGYQ96C11 551 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 HAO2Q9NYQ3 351 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 CGGBP1Q9UFW8 167 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 NTNG1Q9Y2I2 539 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 LOC102725191A0A1B0GVB3 256 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 RGS11O94810 467 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 ACVR1Q04771 509 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 PDXPQ96GD0 296 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 HINT3Q9NQE9 182 aaKnown RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 MARCH5Q9NX47 278 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 HSPB6O14558 160 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 LGI1O95970 557 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 NPY4RP50391 375 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 MFGE8Q08431 387 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF385BQ569K4 471 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 SFRP5Q5T4F7 317 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 SYT9Q86SS6 491 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF845Q96IR2 970 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 TOLLIPQ9H0E2 274 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 DNAJB11Q9UBS4 358 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 A0A1B0GUH1 482 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 ZNF98A6NK75 572 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 TRAPPC2LH3BP13 241 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 MGMTP16455 207 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 MCCD1P59942 119 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 ARSJQ5FYB0 599 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 PLPP5Q8NEB5 264 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 SECTM1Q8WVN6 248 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 GCDHQ92947 438 aaPredicted RBP15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 WDFY2Q96P53 400 aa15.15■□□□□ 0.02
SH3RF1-201ENST00000284637 TMEM30AQ9NV96 361 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms