RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 OR51A4Q8NGJ6 313 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 OR10Z1Q8NGY1 313 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PIGQQ9BRB3 760 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 IKZF5Q9H5V7 419 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 GORASP2Q9H8Y8 452 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 UCK1Q9HA47 277 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 EIF1BO60739 113 aaKnown RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PTBP1P26599 531 aaKnown RBP eCLIP8.09□□□□□ -1.111e-6■■■■■ 27.7
NIPBL-201ENST00000282516 ZNF93P35789 620 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ERVPABLB-1P60509 514 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SIRPAP78324 504 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ASB13Q8WXK3 278 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PHOX2AO14813 284 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 LALBAP00709 142 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ATXN1LP0C7T5 689 aaKnown RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 TNFSF8P32971 234 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 EDDM3BP56851 147 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 C1orf61Q13536 156 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 CLDN22Q8N7P3 220 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 LRRC3CA6NJW4 275 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 LGALS8O00214 317 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ARPC3O15145 178 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SSSCA1O60232 199 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SIX6O95475 246 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PMP2P02689 132 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 AAED1Q7RTV5 226 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 C11orf42Q8N5U0 333 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 GLIS1Q8NBF1 620 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 APIPQ96GX9 242 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ZDHHC11Q9H8X9 412 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 GDE1Q9NZC3 331 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PHLPP1O60346 1717 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 MON2Q7Z3U7 1717 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 LOC102723971A0A1B0GUV8 181 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 JTBO76095 146 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SOX18P35713 384 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 MTNR1BP49286 362 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 WNT7BP56706 349 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 TMEM135Q86UB9 458 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SCCPDHQ8NBX0 429 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 OR2AE1Q8NHA4 323 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PHYHIPQ92561 330 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 CIB3Q96Q77 187 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 OBP2AQ9NY56 170 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 NOSIPQ9Y314 301 aaKnown RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 HSD17B6O14756 317 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 MMP7P09237 267 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 AKR1C3P42330 323 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 CLDN17P56750 224 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 RPS25P62851 125 aaKnown RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 EMX1Q04741 257 aaPredicted RBP8.09□□□□□ -1.11
NIPBL-201ENST00000282516 LETMD1Q6P1Q0 360 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 Q6ZSR6 202 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 TMUB2Q71RG4 321 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 LRRTM1Q86UE6 522 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 ZNF595Q8IYB9 648 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 FBXO8Q9NRD0 319 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PADI1Q9ULC6 663 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 OR10A3P58181 314 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PDZK1IP1Q13113 114 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 PDZD11Q5EBL8 140 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 DGAT2L6Q6ZPD8 337 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SIAH3Q8IW03 269 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SLC38A6Q8IZM9 456 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 OR6M1Q8NGM8 313 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 FIBINQ8TAL6 211 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 SLC29A1Q99808 456 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 CABLES2Q9BTV7 478 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 CORINQ9Y5Q5 1042 aa8.09□□□□□ -1.11
NIPBL-201ENST00000282516 GALR2O43603 387 aaPredicted RBP8.09□□□□□ -1.12
NIPBL-201ENST00000282516 RAB1AP62820 205 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 PLK5Q496M5 336 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 MARCH8Q5T0T0 291 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 DPPA4Q7L190 304 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 SYT9Q86SS6 491 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 OR10G3Q8NGC4 313 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 FAM3DQ96BQ1 224 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 C20orf24Q9BUV8 137 aa8.09□□□□□ -1.12
NIPBL-201ENST00000282516 A6NIN4 97 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 ACSM4P0C7M7 580 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 HIST1H1TP22492 207 aaPredicted RBP8.08□□□□□ -1.12
NIPBL-201ENST00000282516 APEX1P27695 318 aaKnown RBP8.08□□□□□ -1.12
NIPBL-201ENST00000282516 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 GPR150Q8NGU9 434 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 C12orf42Q96LP6 360 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 AHRP35869 848 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 RAB33AQ14088 237 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 KIF26BQ2KJY2 2108 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 MRPL2Q5T653 305 aaKnown RBP8.08□□□□□ -1.12
NIPBL-201ENST00000282516 LYSMD4Q5XG99 296 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 OR2A1Q8NGT9 310 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 XYLT2Q9H1B5 865 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 MRPL22Q9NWU5 206 aaKnown RBP8.08□□□□□ -1.12
NIPBL-201ENST00000282516 MRC1P22897 1456 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 STC2O76061 302 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 GLCEO94923 617 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 SCG5P05408 212 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 CFHP08603 1231 aa8.08□□□□□ -1.12
NIPBL-201ENST00000282516 AGFG1P52594 562 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms