RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 SNRPNP63162 240 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 ADARB1P78563 741 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 ACVR1Q04771 509 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CHRNEQ04844 493 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PRDX1Q06830 199 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 SRSF5Q13243 272 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 HLXQ14774 488 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 XKR7Q5GH72 579 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PRSS36Q5K4E3 855 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 UBE2UQ5VVX9 321 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TMEM108Q6UXF1 575 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GPAT4Q86UL3 456 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 FOXRED2Q8IWF2 684 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PARP16Q8N5Y8 322 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ASCC1Q8N9N2 400 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 BHLHE23Q8NDY6 225 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR2L3Q8NG85 312 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 HCAR2Q8TDS4 363 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ADAMTS16Q8TE57 1224 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 FCAMRQ8WWV6 532 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR1E3Q8WZA6 343 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CDS1Q92903 461 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZMYND19Q96E35 227 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 NIPSNAP1Q9BPW8 284 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 APOOQ9BUR5 198 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 NMNAT2Q9BZQ4 307 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 AMBRA1Q9C0C7 1298 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LRRN3Q9H3W5 708 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 IKZF5Q9H5V7 419 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 EGLN3Q9H6Z9 239 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 DDX31Q9H8H2 851 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 PELI2Q9HAT8 420 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 MSL2Q9HCI7 577 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 RANGRFQ9HD47 186 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 SDHAF3Q9NRP4 125 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 THSD1Q9NS62 852 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR6C3Q9NZP0 311 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 MBD2Q9UBB5 411 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 NPIPA1Q9UND3 350 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CA5BQ9Y2D0 317 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 STRAPQ9Y3F4 350 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 CROCCQ5TZA2 2017 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZFHX2Q9C0A1 2572 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 A0A0B4J293 547 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 B5MCH6 92 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 E9PI62 339 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 K7ESM1 405 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SGK494L7N484 410 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CDC40O60508 579 aaKnown RBP eCLIP2.62□□□□□ -1.99
HERC4-201ENST00000277817 PSPNO60542 156 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 RAD1O60671 282 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SLC19A2O60779 497 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR2B3O76000 313 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PPP1R3DO95685 299 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PEX11BO96011 259 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PTHP01270 115 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 IFNA7P01567 189 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 C1QAP02745 245 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 MAS1P04201 325 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CELA2BP08218 269 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 RNH1P13489 461 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 PVRP15151 417 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GPX2P18283 190 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CR2P20023 1033 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 HIST1H1TP22492 207 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 HSD11B1P28845 292 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ISL1P61371 349 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 HHEXQ03014 270 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SMCO1Q147U7 214 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ATXN7L3Q14CW9 347 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 EXOSC7Q15024 291 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 ADPRMQ3LIE5 342 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PDLIM3Q53GG5 364 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 FAM78AQ5JUQ0 283 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TMEM31Q5JXX7 168 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PHF19Q5T6S3 580 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 VASNQ6EMK4 673 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 THOC7Q6I9Y2 204 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 PYHIN1Q6K0P9 492 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TMEM53Q6P2H8 277 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CNIH2Q6PI25 160 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ZNF852Q6ZMS4 543 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GKN2Q86XP6 184 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 GPALPP1Q8IXQ4 340 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 ENTHD1Q8IYW4 607 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 METTL4Q8N3J2 472 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 DNAJC22Q8N4W6 341 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SLC38A9Q8NBW4 561 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 OR4F15Q8NGB8 312 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 LRRC20Q8TCA0 184 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 AKAP1Q92667 903 aaKnown RBP eCLIP2.62□□□□□ -1.99
HERC4-201ENST00000277817 SGTBQ96EQ0 304 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 METTL2AQ96IZ6 378 aaKnown RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 ALOXE3Q9BYJ1 711 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 TPSD1Q9BZJ3 242 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 PDFQ9HBH1 243 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 CPNE5Q9HCH3 593 aa2.62□□□□□ -1.99
HERC4-201ENST00000277817 SPATA6Q9NWH7 488 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 TEX10Q9NXF1 929 aaPredicted RBP2.62□□□□□ -1.99
HERC4-201ENST00000277817 RDH8Q9NYR8 311 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms