RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ABHD5Q8WTS1 349 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 EXTL1Q92935 676 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 MUCL1Q96DR8 90 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF426Q9BUY5 554 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR51I1Q9H343 314 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 FBXO4Q9UKT5 387 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 Q9Y3F1 56 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 MTCH2Q9Y6C9 303 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 KCNE1BA0A087WTH5 132 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 SOCS6O14544 535 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 FGF1P05230 155 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 C8GP07360 202 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR8U9P0C7N5 309 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TRGC1P0CF51 173 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 DPP4P27487 766 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 CD82P27701 267 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 GPR15P49685 360 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 AFF3P51826 1226 aaKnown RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 PDX1P52945 283 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 CRYBB1P53674 252 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 CLDN12P56749 244 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 RAB1AP62820 205 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 RAB35Q15286 201 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR4K17Q8NGC6 315 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR4K14Q8NGD5 310 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR6T1Q8NGN1 323 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 OR8U1Q8NH10 309 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 RNASEH2CQ8TDP1 164 aaKnown RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 ARSGQ96EG1 525 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 FAM46AQ96IP4 442 aaKnown RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 JSRP1Q96MG2 331 aaPredicted RBP8.41□□□□□ -1.06
PDGFC-201ENST00000274071 FAAP24Q9BTP7 215 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 DNAJC4Q9NNZ3 241 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 CHST11Q9NPF2 352 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 PADI1Q9ULC6 663 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 ANGPT4Q9Y264 503 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 POMT1Q9Y6A1 747 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 TRPM7Q96QT4 1865 aa8.41□□□□□ -1.06
PDGFC-201ENST00000274071 PIRO00625 290 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 GPR39O43194 453 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 IL3P08700 152 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 CLTBP09497 229 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 ARAFP10398 606 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 IRF2P14316 349 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SELEP16581 610 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 EPHA1P21709 976 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 CSNK1DP48730 415 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 PPP2CBP62714 309 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 PPP2CAP67775 309 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF235Q14590 738 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 MED27Q6P2C8 311 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 BTNL3Q6UXE8 466 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 TMEM99Q8N816 258 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SYNPRQ8TBG9 265 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 OIT3Q8WWZ8 545 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SOCS4Q8WXH5 440 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 EDAQ92838 391 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 CNN2Q99439 309 aaKnown RBP8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SEMA3CQ99985 751 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SEPSECSQ9HD40 501 aaKnown RBP8.4□□□□□ -1.06
PDGFC-201ENST00000274071 GULP1Q9UBP9 304 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 ATG4BQ9Y4P1 393 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 HS3ST3B1Q9Y662 390 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 A0A0C4DFX4 3053 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 HTTP42858 3142 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 LNP1A1A4G5 178 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 FAM171A2A8MVW0 826 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 UMAD1C9J7I0 102 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 NPC1O15118 1278 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 FGF10O15520 208 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SLC2A10O95528 541 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 AKR1A1P14550 325 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 CTGFP29279 349 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 OR5I1Q13606 314 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 ENPP2Q13822 863 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 ZNF343Q6P1L6 599 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 WDR88Q6ZMY6 472 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 DNM1P46Q6ZS02 220 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 OR14K1Q8NGZ2 314 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 Q8WTZ3 238 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 FAM210BQ96KR6 192 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SMIM14Q96QK8 99 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 NKX3-1Q99801 234 aaPredicted RBP8.4□□□□□ -1.06
PDGFC-201ENST00000274071 ADGRE3Q9BY15 652 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 GOLGA2P5Q9HBQ8 144 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SERINC1Q9NRX5 453 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 MARCH5Q9NX47 278 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 TRPC4Q9UBN4 977 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 SUSD2Q9UGT4 822 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 IL36AQ9UHA7 158 aa8.4□□□□□ -1.06
PDGFC-201ENST00000274071 DAPL1A0PJW8 107 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 GXYLT2A0PJZ3 443 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 ZC3H12DA2A288 527 aaKnown RBP8.4□□□□□ -1.07
PDGFC-201ENST00000274071 MYADML2A6NDP7 307 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 TMEM238C9JI98 176 aa8.4□□□□□ -1.07
PDGFC-201ENST00000274071 RNASET2O00584 256 aaKnown RBP8.4□□□□□ -1.07
PDGFC-201ENST00000274071 LRP3O75074 770 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms