RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 ASPNQ9BXN1 380 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 ISYNA1Q9NPH2 558 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 WNT4P56705 351 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 POU4F2Q12837 409 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 MLLT11Q13015 90 aaPredicted RBP21.95■■□□□ 1.1
SSBP4-201ENST00000270061 SCAIQ8N9R8 606 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 OR51G2Q8NGK0 314 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 CA5BP1Q8WTZ4 195 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 RASD2Q96D21 266 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 OPALINQ96PE5 141 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 CHST11Q9NPF2 352 aa21.95■■□□□ 1.1
SSBP4-201ENST00000270061 SPIN1Q9Y657 262 aaPredicted RBP21.95■■□□□ 1.1
SSBP4-201ENST00000270061 INTS1Q8N201 2190 aaKnown RBP21.95■■□□□ 1.1
SSBP4-201ENST00000270061 TEX13CA0A0J9YWL9 993 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 PLPP3O14495 311 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 SLC22A1O15245 554 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 WDR1O75083 606 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 F13BP05160 661 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 HSMCR30P0CW71 290 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 GRNP28799 593 aaKnown RBP21.94■■□□□ 1.1
SSBP4-201ENST00000270061 LGALS3BPQ08380 585 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 DOC2BQ14184 412 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 CDSNQ15517 529 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 SLC35D3Q5M8T2 416 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 SHFQ7M4L6 423 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 RND1Q92730 232 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 NMNAT3Q96T66 252 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 INPP5EQ9NRR6 644 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 ALKBH4Q9NXW9 302 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 GRHPRQ9UBQ7 328 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 A0A1W2PPW3 197 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 CCRL2O00421 344 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 CLUP10909 449 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 SLC25A1P53007 311 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 RPS7P62081 194 aaKnown RBP21.94■■□□□ 1.1
SSBP4-201ENST00000270061 PMPCAQ10713 525 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 ZP4Q12836 540 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 AQP6Q13520 282 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 ACBD7Q8N6N7 88 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 ZNF485Q8NCK3 441 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 ARL5BQ96KC2 179 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 INIPQ9NRY2 104 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 ERVK13-1Q9NX77 482 aa21.94■■□□□ 1.1
SSBP4-201ENST00000270061 OR6C68A6NDL8 312 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 PAX7P23759 505 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 CDKN2AP42771 156 aaKnown RBP21.93■■□□□ 1.1
SSBP4-201ENST00000270061 CLK1P49759 484 aaKnown RBP21.93■■□□□ 1.1
SSBP4-201ENST00000270061 DSCR4P56555 118 aaPredicted RBP21.93■■□□□ 1.1
SSBP4-201ENST00000270061 GGTLC2Q14390 218 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 C3orf33Q6P1S2 294 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 JAZF1Q86VZ6 243 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 OR52N1Q8NH53 320 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 TSPAN32Q96QS1 320 aa21.93■■□□□ 1.1
SSBP4-201ENST00000270061 MYCBPQ99417 103 aaPredicted RBP21.93■■□□□ 1.1
SSBP4-201ENST00000270061 CBR3O75828 277 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 IGHMP01871 453 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SBK2P0C263 348 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 GABRA1P14867 456 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 IDUAP35475 653 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 TSTQ16762 297 aaKnown RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 LCN1P1Q5VSP4 162 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 B3GLCTQ6Y288 498 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 GTPBP8Q8N3Z3 284 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 ZNF417Q8TAU3 575 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SLC25A43Q8WUT9 341 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 ZNF587Q96SQ5 575 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 ADGRL4Q9HBW9 690 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SEC14L4Q9UDX3 406 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 ZNF346Q9UL40 294 aaKnown RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 FAM215AQ9Y5M1 114 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 ABCA12Q86UK0 2595 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SHISA8B8ZZ34 492 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 OR6A2O95222 327 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 HOXD4P09016 255 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 IMPDH2P12268 514 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 IL11P20809 199 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 NR4A1P22736 598 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SELENBP1Q13228 472 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SPCS2Q15005 226 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 PON3Q15166 354 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 LEG1Q6P5S2 330 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 LHFPL3Q86UP9 236 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 FAM83FQ8NEG4 500 aaPredicted RBP21.92■■□□□ 1.1
SSBP4-201ENST00000270061 OR9Q1Q8NGQ5 310 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 ASB5Q8WWX0 329 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 SNX18Q96RF0 628 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 TTYH2Q9BSA4 534 aa21.92■■□□□ 1.1
SSBP4-201ENST00000270061 DCHS2Q6V1P9 2916 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 HCFC1P51610 2035 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 LIPT2A6NK58 231 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 AIREO43918 545 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 GYPBP06028 91 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 SPI1P17947 270 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 GADD45AP24522 165 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 DIO1P49895 249 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 SLC16A1P53985 500 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 ACSM1Q08AH1 577 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 KRR1Q13601 381 aaKnown RBP21.91■■□□□ 1.1
SSBP4-201ENST00000270061 SSX1Q16384 188 aa21.91■■□□□ 1.1
SSBP4-201ENST00000270061 WIPI1Q5MNZ9 446 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms