RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CCL7P80098 99 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 FOXK2Q01167 660 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ZNF676Q8N7Q3 588 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ACBD4Q8NC06 268 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ANKRD9Q96BM1 317 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 MOGAT1Q96PD6 335 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TSPAN10Q9H1Z9 355 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OR10A4Q9H209 315 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 MED29Q9NX70 200 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 GPR160Q9UJ42 338 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CHST2Q9Y4C5 530 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TECTAO75443 2155 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SERTM1A2A2V5 107 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 EFCAB7A8K855 629 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TRIM3O75382 744 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CCNOP22674 350 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 RAB38P57729 211 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 UBE2MP61081 183 aaKnown RBP12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PPP3R1P63098 170 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 HLA-BQ31612 363 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TCTE1Q5JU00 501 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PDSS1Q5T2R2 415 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 QSOX2Q6ZRP7 698 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OR4C15Q8NGM1 316 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 GRHPRQ9UBQ7 328 aa12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 C19orf53Q9UNZ5 99 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TMEM200CA6NKL6 621 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 KHDRBS3O75525 346 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 NID1P14543 1247 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 BEX5Q5H9J7 111 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SLC38A9Q8NBW4 561 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 C10orf90Q96M02 699 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ENTPD2Q9Y5L3 495 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 FKBP7Q9Y680 259 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 THY1P04216 161 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 H2AFB2P0C5Z0 115 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TBXA2RP21731 343 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PSMA6P60900 246 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ILKQ13418 452 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 RIN1Q13671 783 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PRICKLE4Q2TBC4 344 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OR7E24Q6IFN5 339 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PRSS45Q7RTY3 260 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OR8S1Q8NH09 359 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 THAP6Q8TBB0 222 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 RFKQ969G6 155 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SPACA5Q96QH8 159 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OR1F2PQ96R84 312 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 THAP7Q9BT49 309 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TMEM43Q9BTV4 400 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 NUDT9Q9BW91 350 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 GABARAPL3Q9BY60 117 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OR51B6Q9H340 312 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ZCCHC4Q9H5U6 513 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ESRP2Q9H6T0 727 aaKnown RBP12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TREM1Q9NP99 234 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 KLHL13Q9P2N7 655 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ANKRD11Q6UB99 2663 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CYR61O00622 381 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PRAMEF2O60811 474 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 UTS2O95399 124 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SLC1A3P43003 542 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 UBE2IP63279 158 aaKnown RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 HSD11B2P80365 405 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CHAF1BQ13112 559 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PAPD4Q6PIY7 484 aaKnown RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 FGD2Q7Z6J4 655 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SLC2A12Q8TD20 617 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PITX2Q99697 317 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TGIF2Q9GZN2 237 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 NXF2Q9GZY0 626 aaKnown RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 GABARAPL1Q9H0R8 117 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ZFP64Q9NPA5 681 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OCIAD1Q9NX40 245 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 KCNMB2Q9Y691 235 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 WNK2Q9Y3S1 2297 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ANXA2P2A6NMY6 339 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 RCBTB2O95199 551 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 IFNGP01579 166 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SNRPBP14678 240 aaKnown RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 EMP2P54851 167 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 WNT4P56705 351 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CLDN20P56880 219 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 DEFA6Q01524 100 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SERTAD2Q14140 314 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 APOOLQ6UXV4 268 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 TMEM185AQ8NFB2 350 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 FAM46BQ96A09 425 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 KTI12Q96EK9 354 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 WDR89Q96FK6 387 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 OTOGLQ3ZCN5 2332 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 CDHR4A6H8M9 788 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 ZNF705EA8MWA4 302 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 FAM25EA8MYX2 175 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 PRODHO43272 600 aa12.87□□□□□ -0.35
TNFRSF11A-201ENST00000269485 SLC16A7O60669 478 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms