RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 SAMD8Q96LT4 415 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 PLA2G12AQ9BZM1 189 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 ASH1LQ9NR48 2969 aaKnown RBP16.15■□□□□ 0.18
SDF4-201ENST00000263741 HRNRQ86YZ3 2850 aaPredicted RBP16.15■□□□□ 0.18
SDF4-201ENST00000263741 AKAP8O43823 692 aaKnown RBP16.15■□□□□ 0.18
SDF4-201ENST00000263741 RAD51DO75771 328 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 SEC14L2O76054 403 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 NDUFB2O95178 105 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 PPP1R3DO95685 299 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 IGFBP2P18065 325 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 CLEC12AQ5QGZ9 265 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 SMARCD3Q6STE5 483 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 RASD2Q96D21 266 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 LRRC46Q96FV0 321 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 Q96M85 177 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 ELOVL5Q9NYP7 299 aa16.15■□□□□ 0.18
SDF4-201ENST00000263741 NBPF19A0A087WUL8 3843 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 FLNBO75369 2602 aaKnown RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 H7C1C5 153 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 DAP3P51398 398 aaKnown RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 PRPS1P60891 318 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 LCN6P62502 163 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 ARMC4Q5T2S8 1044 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 SHQ1Q6PI26 577 aaKnown RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 LINC00471Q8N535 108 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 OR8D4Q8NGM9 314 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 OR6N1Q8NGY5 312 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 ZC3HAV1LQ96H79 300 aaKnown RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 RDH12Q96NR8 316 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 TXNIPQ9H3M7 391 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 ZNF346Q9UL40 294 aaKnown RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 COX5AP20674 150 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 DBPQ10586 325 aaPredicted RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 SFRP5Q5T4F7 317 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 SP5Q6BEB4 398 aaPredicted RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 ALKBH2Q6NS38 261 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 EGFL6Q8IUX8 553 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 GPR137CQ8N3F9 429 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 POMGNT2Q8NAT1 580 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 OR6X1Q8NH79 312 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 HDAC2Q92769 488 aaKnown RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 KISS1RQ969F8 398 aaPredicted RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 S100PBPQ96BU1 408 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 ACTR6Q9GZN1 396 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 PLGRKTQ9HBL7 147 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 FOXD3Q9UJU5 478 aaPredicted RBP16.14■□□□□ 0.17
SDF4-201ENST00000263741 MGAT4BQ9UQ53 548 aa16.14■□□□□ 0.17
SDF4-201ENST00000263741 C16orf97H3BN30 126 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 CD14P08571 375 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 PGA4P0DJD7 388 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 PGA3P0DJD8 388 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 ACVR1BP36896 505 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 CSNK1A1P48729 337 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 ALDH3A2P51648 485 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 RPL27P61353 136 aaKnown RBP16.13■□□□□ 0.17
SDF4-201ENST00000263741 ITGADQ13349 1161 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 KLHL17Q6TDP4 642 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 USP51Q70EK9 711 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 C20orf196Q8IYI0 205 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 NOXO1Q8NFA2 376 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 ZNF519Q8TB69 540 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 HTRA1Q92743 480 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 ZNF566Q969W8 418 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 NRBF2Q96F24 287 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 SLC25A44Q96H78 314 aaPredicted RBP16.13■□□□□ 0.17
SDF4-201ENST00000263741 DGCR6LQ9BY27 220 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 CRLF2Q9HC73 371 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 CDH10Q9Y6N8 788 aa16.13■□□□□ 0.17
SDF4-201ENST00000263741 TEX13CA0A0J9YWL9 993 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 A0A1W2PR80 420 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 ZNF587BE7ETH6 402 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 IMPA2O14732 288 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 PFDN1O60925 122 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 IGHMP01871 453 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 TP53P04637 393 aaPredicted RBP16.12■□□□□ 0.17
SDF4-201ENST00000263741 IL32P24001 234 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 CLRN1P58418 232 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 ADARB1P78563 741 aaKnown RBP16.12■□□□□ 0.17
SDF4-201ENST00000263741 FMODQ06828 376 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 DAG1Q14118 895 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 STK11Q15831 433 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 ANKDD1AQ495B1 522 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 MESTQ5EB52 335 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 BHLHA15Q7RTS1 189 aaPredicted RBP16.12■□□□□ 0.17
SDF4-201ENST00000263741 FAM122BQ7Z309 247 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 DMRTC2Q8IXT2 367 aaPredicted RBP16.12■□□□□ 0.17
SDF4-201ENST00000263741 ZNF433Q8N7K0 673 aaPredicted RBP16.12■□□□□ 0.17
SDF4-201ENST00000263741 ATG16L2Q8NAA4 619 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 OR5K1Q8NHB7 308 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 C12orf43Q96C57 262 aaKnown RBP16.12■□□□□ 0.17
SDF4-201ENST00000263741 ULBP2Q9BZM5 246 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 GPR35Q9HC97 309 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 TAS2R16Q9NYV7 291 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 CRIM1Q9NZV1 1036 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 KIF17Q9P2E2 1029 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 IER3IP1Q9Y5U9 82 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 ABCA4P78363 2273 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 ARRDC5A6NEK1 342 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 TUBAL3A6NHL2 446 aa16.12■□□□□ 0.17
SDF4-201ENST00000263741 SNAP29O95721 258 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms