RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 PRAMEF26H0Y7S4 382 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 GPX5O75715 221 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 HOXA1P49639 335 aaPredicted RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 SNRPGP62308 76 aaKnown RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 CAMK2BQ13554 666 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 SYPL1Q16563 259 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 SOWAHCQ53LP3 525 aaPredicted RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 OR52I2Q8NH67 350 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 SLC39A7Q92504 469 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 LOC102724200A0A096LPH7 203 aaPredicted RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 ACKR3P25106 362 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 SDHAP31040 664 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 MRPL21Q7Z2W9 205 aaKnown RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 CNTN4Q8IWV2 1026 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 ADIPOR1Q96A54 375 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 TECTBQ96PL2 329 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 NKX3-1Q99801 234 aaPredicted RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 CDCP1Q9H5V8 836 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 A0A1B0GTW7 788 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 CTRB1P17538 263 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 HNRNPA2B1P22626 353 aaKnown RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 PTTG1IPP53801 180 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 ELLP55199 621 aaPredicted RBP9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 DEFB109BQ30KR1 87 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 CTRB2Q6GPI1 263 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 LINC00696Q6ZRV3 163 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 CORO2AQ92828 525 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 FAM3DQ96BQ1 224 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 TVP23CQ96ET8 276 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 PEX11GQ96HA9 241 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 OBP2BQ9NPH6 170 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 NDUFB11Q9NX14 153 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 FLVCR2Q9UPI3 526 aa9.96□□□□□ -0.82
SLC6A4-201ENST00000261707 B4GALT3O60512 393 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 CPEP16870 476 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 CDONQ4KMG0 1287 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 C15orf39Q6ZRI6 1047 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 TMEM123Q8N131 208 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ACVR1CQ8NER5 493 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 OR51A4Q8NGJ6 313 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 OR1J2Q8NGS2 313 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 OR6S1Q8NH40 331 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 CA5BP1Q8WTZ4 195 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 BOD1Q96IK1 185 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 SRRQ9GZT4 340 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 TREX1Q9NSU2 369 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 RBPJLQ9UBG7 517 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 COCHO43405 550 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 PIPP12273 146 aaPredicted RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ELAVL4P26378 380 aaKnown RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 DPP4P27487 766 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 PELI3Q8N2H9 469 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 SUMF1Q8NBK3 374 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 TMEM178AQ8NBL3 297 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 SAT2Q96F10 170 aaPredicted RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 AKR1E2Q96JD6 320 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 TPPP3Q9BW30 176 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 SLC2A11Q9BYW1 496 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ZDHHC11Q9H8X9 412 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 MRPS28Q9Y2Q9 187 aaKnown RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 MYH7P12883 1935 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 BCL2L11O43521 198 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ATP1B3P54709 279 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 HBA1P69905 142 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ARL16Q0P5N6 197 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 FABP9Q0Z7S8 132 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 MLF2Q15773 248 aaPredicted RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ADGRE4PQ86SQ3 457 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 PPP1R3BQ86XI6 285 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ZFP62Q8NB50 900 aaPredicted RBP9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 OR13C8Q8NGS7 320 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 SECTM1Q8WVN6 248 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 TMEM106AQ96A25 262 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF816-ZNF321PA0A0X1KG74 233 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ANKRD30BLA7E2S9 258 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 SFTPDP35247 375 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 BAMBIQ13145 260 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 OVCH1Q7RTY7 1134 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF321PQ8N8H1 164 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ADAMTS18Q8TE60 1221 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ENKD1Q9H0I2 346 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ZNF727A8MUV8 499 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 LGI1O95970 557 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 MOB3CQ70IA8 216 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 LRRTM1Q86UE6 522 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 EGLN2Q96KS0 407 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 ATOH8Q96SQ7 321 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 FAM173AQ9BQD7 235 aa9.95□□□□□ -0.82
SLC6A4-201ENST00000261707 KDM4EB2RXH2 506 aaPredicted RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 MKRN2OSH3BPM6 223 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 FCGR2AP12318 317 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 F2RL1P55085 397 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 UBE2MP61081 183 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 CEBPEQ15744 281 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 PLAC9Q5JTB6 97 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 RNF113BQ8IZP6 322 aaKnown RBP9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 CPXM2Q8N436 756 aa9.94□□□□□ -0.82
SLC6A4-201ENST00000261707 LMNTD1Q8N9Z9 388 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms