RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 PSMB5P28074 263 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SLC6A6P31641 620 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 CD80P33681 288 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 GLP1RP43220 463 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SKP2Q13309 424 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ALKBH1Q13686 389 aaKnown RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 HYAL4Q2M3T9 481 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 EIPR1Q53HC9 387 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 DRAM2Q6UX65 266 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF793Q6ZN11 406 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SLC24A5Q71RS6 500 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ETFBKMTQ8IXQ9 262 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SLC16A11Q8NCK7 471 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 OR6K6Q8NGW6 343 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 OR5AK2Q8NH90 309 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SLAMF9Q96A28 289 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 AKR1E2Q96JD6 320 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 GAS2L1Q99501 681 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF559Q9BR84 538 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 PELI2Q9HAT8 420 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 MYOZ1Q9NP98 299 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 CXXC1Q9P0U4 656 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ATXN7L1Q9ULK2 861 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 TRAV8-7A0A075B6U6 113 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 TEX13DA0A0J9YY54 714 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 CENPVL1A0A0U1RR11 272 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1B0GVT2 93 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1W2PR48 441 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 C5orf51A6NDU8 294 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 H3BSH0 61 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 MFNGO00587 321 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SRPX2O60687 465 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 HOXC4P09017 264 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 LAMP2P13473 410 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 NME2P22392 152 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ITGA3P26006 1051 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 PSMB6P28072 239 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ADH6P28332 368 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 OR1D2P34982 312 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 PMELP40967 661 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 HGFACQ04756 655 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 SSBP1Q04837 148 aaKnown RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 GGTLC2Q14390 218 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF658BQ4V348 819 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 DHRS11Q6UWP2 260 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 RHOUQ7L0Q8 258 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 KCTD9Q7L273 389 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 BPIFB2Q8N4F0 458 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 PAQR4Q8N4S7 273 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 FIBINQ8TAL6 211 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 FGF13Q92913 245 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ARSGQ96EG1 525 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 MEGF10Q96KG7 1140 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 Q96M85 177 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ATG5Q9H1Y0 275 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 OR2AG1Q9H205 316 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 CHMP1AQ9HD42 196 aaPredicted RBP6.58□□□□□ -1.36
CSDE1-201ENST00000261443 CACFD1Q9UGQ2 172 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 ATG4BQ9Y4P1 393 aa6.58□□□□□ -1.36
CSDE1-201ENST00000261443 C13orf42A0A1B0GVH6 325 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TMEM72A0PK05 275 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 DUXAA6NLW8 204 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SLC31A2O15432 143 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 AK4P27144 223 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ACTR1BP42025 376 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 POU3F4P49335 361 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SCAND1P57086 179 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 REEP5Q00765 189 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ELAVL2Q12926 359 aaKnown RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SSX2Q16385 188 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 PYY3Q5JQD4 70 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ARHGAP40Q5TG30 622 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TXNDC8Q6A555 127 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 C17orf99Q6UX52 265 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 Q6ZNB5 142 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 LYG2Q86SG7 212 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TMEM229BQ8NBD8 167 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 GPX8Q8TED1 209 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CASTOR1Q8WTX7 329 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ZNRF4Q8WWF5 429 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TFGQ92734 400 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 C3orf49Q96BT1 292 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SAT2Q96F10 170 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 PHB2Q99623 299 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF350Q9GZX5 532 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 KCNK15Q9H427 330 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 POLE3Q9NRF9 147 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 PPP4R1LQ9P1A2 415 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 HCSTQ9UBK5 93 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SLC25A13Q9UJS0 675 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 HS3ST2Q9Y278 367 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 MYO7AQ13402 2215 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 LOC100509620A0A075B734 347 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 DBX1A6NMT0 343 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 C9JQL5 133 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CDC40O60508 579 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ALOX12BO75342 701 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CYB5AP00167 134 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 RPLP2P05387 115 aaKnown RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 194.7 ms