RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 SERPINB10P48595 397 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 MEOX1P50221 254 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 LSM3P62310 102 aaKnown RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF85Q03923 595 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 MRPL49Q13405 166 aaKnown RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF239Q16600 458 aaKnown RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 ZNF324BQ6AW86 544 aaPredicted RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 NHLRC1Q6VVB1 395 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 YRDCQ86U90 279 aaKnown RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 PM20D2Q8IYS1 436 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 OR6V1Q8N148 313 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 KLHL36Q8N4N3 616 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 POMGNT2Q8NAT1 580 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 FAM83FQ8NEG4 500 aaPredicted RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 OR10H4Q8NGA5 316 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 ASB10Q8WXI3 467 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 CNN2Q99439 309 aaKnown RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 PIGQQ9BRB3 760 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 ALG12Q9BV10 488 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 OR2B2Q9GZK3 357 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 SYT4Q9H2B2 425 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 INPP5EQ9NRR6 644 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 BOKQ9UMX3 212 aaPredicted RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 TRAPPC4Q9Y296 219 aa15.58■□□□□ 0.09
SRSF1-201ENST00000258962 MRPS18CQ9Y3D5 142 aaKnown RBP15.58■□□□□ 0.09
SRSF1-201ENST00000258962 ALPK2Q86TB3 2170 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 DAPL1A0PJW8 107 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 PRSS37A4D1T9 235 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 NPIPB13A6NJU9 1138 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 NPIPB4C9JG80 1138 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 XKRYO14609 159 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 SELENOFO60613 162 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 PMS2P2O95744 297 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 ZNF24P17028 368 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 NAA10P41227 235 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 TUBA1BP68363 451 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 HSF1Q00613 529 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 POU3F1Q03052 451 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 RUNX1T1Q06455 604 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 GALEQ14376 348 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 TOMM20Q15388 145 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 EIF2S3LQ2VIR3 472 aaKnown RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 EEF1A1P5Q5VTE0 462 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 ZNF322Q6U7Q0 402 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 LINC00299Q6ZSB3 139 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 TMPPEQ6ZT21 453 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 TUBA1AQ71U36 451 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 PXKQ7Z7A4 578 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 RFLNBQ8N5W9 214 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 OR6K6Q8NGW6 343 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 OR14L1PQ8NHC6 308 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 PRR7Q8TB68 274 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 SPRYD4Q8WW59 207 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 ALG8Q9BVK2 526 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 OR51E2Q9H255 320 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 ISYNA1Q9NPH2 558 aa15.58■□□□□ 0.08
SRSF1-201ENST00000258962 VSX1Q9NZR4 365 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 CAB39Q9Y376 341 aaPredicted RBP15.58■□□□□ 0.08
SRSF1-201ENST00000258962 GCN1Q92616 2671 aaKnown RBP15.57■□□□□ 0.08
SRSF1-201ENST00000258962 AIREO43918 545 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 IFNGR1P15260 489 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 CPEP16870 476 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 ZNF182P17025 639 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-201ENST00000258962 GDF1P27539 372 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 TGFBR1P36897 503 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 HCCSP53701 268 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 VBP1P61758 197 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 NCS1P62166 190 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 RAC1P63000 192 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 KRTCAP3Q53RY4 240 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 SLC35D2Q76EJ3 337 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 SSX6Q7RTT6 188 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 PHC2Q8IXK0 858 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 SLC35F2Q8IXU6 374 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 OR2T4Q8NH00 348 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 NDNFQ8TB73 568 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 NUAK2Q9H093 628 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 ZNF703Q9H7S9 590 aaPredicted RBP15.57■□□□□ 0.08
SRSF1-201ENST00000258962 ISG20L2Q9H9L3 353 aaKnown RBP15.57■□□□□ 0.08
SRSF1-201ENST00000258962 SRA1Q9HD15 236 aaKnown RBP15.57■□□□□ 0.08
SRSF1-201ENST00000258962 NDUFB11Q9NX14 153 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 MOKQ9UQ07 419 aa15.57■□□□□ 0.08
SRSF1-201ENST00000258962 A0A0J9YW62 118 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 A0A1W2PQL4 384 aaPredicted RBP15.56■□□□□ 0.08
SRSF1-201ENST00000258962 SLC22A23A1A5C7 686 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 NPIPA5E9PKD4 350 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 SULT2B1O00204 365 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 RAMP1O60894 148 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 DAP3P51398 398 aaKnown RBP15.56■□□□□ 0.08
SRSF1-201ENST00000258962 ACTC1P68032 377 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 ACTA1P68133 377 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 SLC35A1P78382 337 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 PLGLB1Q02325 96 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 ACSM1Q08AH1 577 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 DGUOKQ16854 277 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 WIPI1Q5MNZ9 446 aaPredicted RBP15.56■□□□□ 0.08
SRSF1-201ENST00000258962 LIPKQ5VXJ0 399 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 GFRALQ6UXV0 394 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 GDPGP1Q6ZNW5 385 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 ZNF511Q8NB15 262 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms