RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 ZNF732B4DXR9 585 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 YES1P07947 543 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 ARSBP15848 533 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 MRPL19P49406 292 aaKnown RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 LIMK1P53667 647 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 YIF1BQ5BJH7 314 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 VTCN1Q7Z7D3 282 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 SGPP2Q8IWX5 399 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TMIGD2Q96BF3 282 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 GUCD1Q96NT3 240 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 MGLLQ99685 303 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF395Q9H8N7 513 aaPredicted RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TCHHQ07283 1943 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TUBGCP6Q96RT7 1819 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 NDUFB3O43676 98 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 DNASE1P24855 282 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 RAB13P51153 203 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 CDNFQ49AH0 187 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 TRMT12Q53H54 448 aaKnown RBP12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 PAQR6Q6TCH4 344 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC16A11Q8NCK7 471 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 NOXO1Q8NFA2 376 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 OR7G2Q8NG99 324 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 ENAMQ9NRM1 1142 aa12.23□□□□□ -0.45
PRPF38A-201ENST00000257181 PARP14Q460N5 1801 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 DENRO43583 198 aaKnown RBP12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 LCMT2O60294 686 aaKnown RBP12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 ADH4P08319 380 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 PRSS3P35030 304 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 EGR3Q06889 387 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 MYEOVQ96EZ4 313 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 SMOC1Q9H4F8 434 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 PRDM7Q9NQW5 492 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 PTTG2Q9NZH5 202 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 GNG12Q9UBI6 72 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 ETV7Q9Y603 341 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 TRAV27A0A087WT01 109 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 TEX51A0A1B0GUA7 166 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 M0R082 166 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 TNFSF11O14788 317 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 AKR7A3O95154 331 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 SHBQ15464 509 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 ASRGL1Q7L266 308 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 WDSUB1Q8N9V3 476 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC25A44Q96H78 314 aaPredicted RBP12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 TMEM246Q9BRR3 403 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 BABAM2Q9NXR7 383 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 TERTO14746 1132 aaKnown RBP12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 P2RX6O15547 441 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF404Q494X3 552 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 PERM1Q5SV97 790 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 SIMC1Q8NDZ2 872 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 CCDC32Q9BV29 185 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 MPIG6BO95866 241 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 QDPRP09417 244 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 CD53P19397 219 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 PTPN6P29350 595 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 HTR1FP30939 366 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 SOX8P57073 446 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 CCDC58Q4VC31 144 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 NHLRC1Q6VVB1 395 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 Q6ZSR9 355 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 MS4A5Q9H3V2 200 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 RLIMQ9NVW2 624 aa12.22□□□□□ -0.45
PRPF38A-201ENST00000257181 B4GALNT1Q00973 533 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 CLIP4Q8N3C7 705 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 BCO1Q9HAY6 547 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 TMPRSS11DO60235 418 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 RECKO95980 971 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 F10P00742 488 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 VAMP1P23763 118 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 ABCD3P28288 659 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 RAC3P60763 192 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 GPNMBQ14956 572 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 EGFL6Q8IUX8 553 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF695Q8IW36 515 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 RASD2Q96D21 266 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF350Q9GZX5 532 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 SLC26A1Q9H2B4 701 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 CRLF2Q9HC73 371 aa12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 ZNF71Q9NQZ8 489 aaPredicted RBP12.21□□□□□ -0.45
PRPF38A-201ENST00000257181 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 AGAP14A8MT82 685 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 CEACAM3P40198 252 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 RNF144AP50876 292 aaPredicted RBP12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 PRTGQ2VWP7 1150 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 ELOVL5Q9NYP7 299 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 PRAMEF4O60810 478 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 RAF1P04049 648 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 PRKACGP22612 351 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 MYF6P23409 242 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 AGTR1P30556 359 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 GIPRP48546 466 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 ACSM5Q6NUN0 579 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 OR6T1Q8NGN1 323 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 LRFN3Q9BTN0 628 aa12.21□□□□□ -0.46
PRPF38A-201ENST00000257181 SLC22A11Q9NSA0 550 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms