RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 ERVFC1-1P60608 527 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 STXBP1P61764 594 aaKnown RBP10.81□□□□□ -0.68
CCNA1-201ENST00000255465 RPS14P62263 151 aaKnown RBP10.81□□□□□ -0.68
CCNA1-201ENST00000255465 RPL38P63173 70 aaKnown RBP10.81□□□□□ -0.68
CCNA1-201ENST00000255465 AKR1C1Q04828 323 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 PCBP2Q15366 365 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCNA1-201ENST00000255465 ARMC12Q5T9G4 340 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 Q6ZVU0 165 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 CACUL1Q86Y37 369 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 THNSL2Q86YJ6 484 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 LRRC56Q8IYG6 542 aaPredicted RBP10.81□□□□□ -0.68
CCNA1-201ENST00000255465 C10orf111Q8N326 155 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 AQP11Q8NBQ7 271 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 MVB12AQ96EY5 273 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 LINGO1Q96FE5 620 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 BOD1Q96IK1 185 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 COMMD4Q9H0A8 199 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 OR2AG1Q9H205 316 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 OR14J1Q9UGF5 321 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 FZD4Q9ULV1 537 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 DOCK9Q9BZ29 2069 aa10.81□□□□□ -0.68
CCNA1-201ENST00000255465 DMDP11532 3685 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 E7EQ34 232 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 GOSR2O14653 212 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF217O75362 1048 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 AHSA1O95433 338 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 CD14P08571 375 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 IL3P08700 152 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 NR2F1P10589 423 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 OR3A1P47881 315 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 MVDP53602 400 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 OR10A3P58181 314 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 ELAVL3Q14576 367 aaKnown RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF805Q5CZA5 627 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 TRIM61Q5EBN2 209 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF776Q68DI1 518 aaPredicted RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 SFRP4Q6FHJ7 346 aaPredicted RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 C11orf87Q6NUJ2 197 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 C22orf39Q6P5X5 142 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 CD300LDQ6UXZ3 194 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF551Q7Z340 670 aaPredicted RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 GOLGA7Q7Z5G4 137 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 TP53INP2Q8IXH6 220 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF664Q8N3J9 261 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 SUMF1Q8NBK3 374 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 OR51S1Q8NGJ8 323 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 SPPL2AQ8TCT8 520 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 BRIX1Q8TDN6 353 aaKnown RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 CCDC107Q8WV48 283 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 PIGKQ92643 395 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 GAL3ST4Q96RP7 486 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 NRSN2Q9GZP1 204 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 SLC6A13Q9NSD5 602 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 CUTCQ9NTM9 273 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 NUDT4Q9NZJ9 180 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 COMMD9Q9P000 198 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 USP36Q9P275 1121 aaKnown RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 TRPC4Q9UBN4 977 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 LPAR3Q9UBY5 353 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 SLC2A6Q9UGQ3 507 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 CYP8B1Q9UNU6 501 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 FCF1Q9Y324 198 aaKnown RBP10.8□□□□□ -0.68
CCNA1-201ENST00000255465 MAP4K5Q9Y4K4 846 aa10.8□□□□□ -0.68
CCNA1-201ENST00000255465 IGHV1OR15-9A0A0B4J2B8 117 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 hCG_1809904A0A1W2PP81 198 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 A0A1W2PR64 198 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 A0A1W2PRV1 198 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 NPIPA2E9PIF3 369 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 SULT2B1O00204 365 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 CYR61O00622 381 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 BNIP3LO60238 219 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ADAP1O75689 374 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ATP1B1P05026 303 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 MELTFP08582 738 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 THEGLP0DJG4 465 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 EPB42P16452 691 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 TBPP20226 339 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ADH6P28332 368 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 PRDX3P30048 256 aaKnown RBP10.79□□□□□ -0.68
CCNA1-201ENST00000255465 DHPSP49366 369 aaPredicted RBP10.79□□□□□ -0.68
CCNA1-201ENST00000255465 KLF3P57682 345 aaPredicted RBP10.79□□□□□ -0.68
CCNA1-201ENST00000255465 NKX6-1P78426 367 aaPredicted RBP10.79□□□□□ -0.68
CCNA1-201ENST00000255465 CLINT1Q14677 625 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 RAB35Q15286 201 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ACTBL2Q562R1 376 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 SYT14P1Q58G82 188 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF789Q5FWF6 425 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ETFRF1Q6IPR1 90 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 GRHL2Q6ISB3 625 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 THOC6Q86W42 341 aaKnown RBP10.79□□□□□ -0.68
CCNA1-201ENST00000255465 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 OR1J2Q8NGS2 313 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 OR2A12Q8NGT7 310 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 FAM216AQ8WUB2 273 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 THAP4Q8WY91 577 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 RELTQ969Z4 430 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF582Q96NG8 517 aaPredicted RBP10.79□□□□□ -0.68
CCNA1-201ENST00000255465 OR1F2PQ96R84 312 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 F2RL3Q96RI0 385 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms