RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 SIKE1Q9BRV8 207 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 PCDHAC1Q9H158 963 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 SLC7A8Q9UHI5 535 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 SVEP1Q4LDE5 3571 aa18.12■□□□□ 0.49
NEDD8-201ENST00000250495 GMNCA6NCL1 334 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 LYNX1G3V0Z9 82 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 KPNA4O00629 521 aaPredicted RBP18.11■□□□□ 0.49
NEDD8-201ENST00000250495 DHHO43323 396 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 BCL10O95999 233 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 PATE4P0C8F1 98 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 LYNX1P0DP58 116 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 UMPSP11172 480 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 DPPA2Q7Z7J5 298 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 LRRC17Q8N6Y2 441 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 TAMM41Q96BW9 452 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 ZNF426Q9BUY5 554 aa18.11■□□□□ 0.49
NEDD8-201ENST00000250495 TMEFF2Q9UIK5 374 aaPredicted RBP18.11■□□□□ 0.49
NEDD8-201ENST00000250495 ZNF346Q9UL40 294 aaKnown RBP18.11■□□□□ 0.49
NEDD8-201ENST00000250495 SLC22A23A1A5C7 686 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 ASAH2BP0C7U1 165 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 IL2RGP31785 369 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 CYLC2Q14093 348 aaPredicted RBP18.1■□□□□ 0.49
NEDD8-201ENST00000250495 TRIP10Q15642 601 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 VMACQ2NL98 169 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 LIPNQ5VXI9 398 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 TMEM53Q6P2H8 277 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 CCDC80Q76M96 950 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 RDH5Q92781 318 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 C1orf159Q96HA4 380 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 SH3GL1Q99961 368 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 RNF121Q9H920 327 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 NPHS2Q9NP85 383 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 TMEM38BQ9NVV0 291 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 DUSP13Q9UII6 198 aa18.1■□□□□ 0.49
NEDD8-201ENST00000250495 BLOC1S5-TXNDC5H3BN57 136 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 IGHG1P01857 330 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 QDPRP09417 244 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 PGA4P0DJD7 388 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 PGA3P0DJD8 388 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 TCN1P20061 433 aaPredicted RBP18.09■□□□□ 0.49
NEDD8-201ENST00000250495 PCMT1P22061 227 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 ALDH3B1P43353 468 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 SEC24CP53992 1094 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 CDH15P55291 814 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 SELENOVP59797 346 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 MELKQ14680 651 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 ELFN2Q5R3F8 820 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 NANOGP8Q6NSW7 305 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 NANOGNBQ7Z5D8 188 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 LRP11Q86VZ4 500 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 ZNF584Q8IVC4 421 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 FGFBP3Q8TAT2 258 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 SH3GL3Q99963 347 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 C19orf24Q9BVV8 132 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 C1orf198Q9H425 327 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 NANOGQ9H9S0 305 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 GPR160Q9UJ42 338 aa18.09■□□□□ 0.49
NEDD8-201ENST00000250495 A0A0G2JND7 137 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 MGRN1O60291 552 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 EDF1O60869 148 aaKnown RBP18.08■□□□□ 0.48
NEDD8-201ENST00000250495 PTHP01270 115 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 HPXP02790 462 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 ACHEP22303 614 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 COL8A2P25067 703 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 GPR6P46095 362 aaPredicted RBP18.08■□□□□ 0.48
NEDD8-201ENST00000250495 GZMMP51124 257 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 TMEM33P57088 247 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 CLRN1P58418 232 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 SLC36A2Q495M3 483 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 NRN1LQ496H8 165 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 RGS7BPQ6MZT1 257 aaPredicted RBP18.08■□□□□ 0.48
NEDD8-201ENST00000250495 SLC16A14Q7RTX9 510 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 TSPYL5Q86VY4 417 aaPredicted RBP18.08■□□□□ 0.48
NEDD8-201ENST00000250495 SLC30A7Q8NEW0 376 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 OR1J2Q8NGS2 313 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 CCT8L2Q96SF2 557 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 PRSS27Q9BQR3 290 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 MEPEQ9NQ76 525 aaPredicted RBP18.08■□□□□ 0.48
NEDD8-201ENST00000250495 BAG5Q9UL15 447 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 FZR1Q9UM11 496 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 SH3GLB1Q9Y371 365 aa18.08■□□□□ 0.48
NEDD8-201ENST00000250495 A0A1W2PPW3 197 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 A0A1W2PRG6 482 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 CENPBD1B2RD01 187 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 B4DSR2 109 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MT-ND1P03886 318 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 FUT1P19526 365 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 SRP14P37108 136 aaKnown RBP18.07■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF84P51523 738 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 DVL1P1P54792 670 aaPredicted RBP18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MRPS11P82912 194 aaKnown RBP18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MAD2L1BPQ15013 274 aaPredicted RBP18.07■□□□□ 0.48
NEDD8-201ENST00000250495 HIST3H3Q16695 136 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 HDDC2Q7Z4H3 204 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 RFLNBQ8N5W9 214 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 OR4K5Q8NGD3 323 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MCHR2Q969V1 340 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 ECSITQ9BQ95 431 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 POLR2J2Q9GZM3 115 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms