RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 TSPAN8P19075 237 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 OMGP23515 440 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 GATA3P23771 443 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 GPC1P35052 558 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 DEFA1P59665 94 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 DEFA3P59666 94 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 UBE2NP61088 152 aaKnown RBP10.27□□□□□ -0.77
RFPL3-201ENST00000249007 TOP3AQ13472 1001 aaPredicted RBP10.27□□□□□ -0.77
RFPL3-201ENST00000249007 TUSC1Q2TAM9 212 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 TBRG1Q3YBR2 411 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 SLC36A3Q495N2 470 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 KLHL26Q53HC5 615 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 FAM205BPQ63HN1 556 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 BRICD5Q6PL45 260 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 SVOPQ8N4V2 548 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 OR5W2Q8NH69 310 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 RHOXF1Q8NHV9 184 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 ENKURQ8TC29 256 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 SLC25A43Q8WUT9 341 aaPredicted RBP10.27□□□□□ -0.77
RFPL3-201ENST00000249007 BOD1Q96IK1 185 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 GPR78Q96P69 363 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 MS4A4EQ96PG1 132 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 C9orf16Q9BUW7 83 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 SEC61A2Q9H9S3 476 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 EFCAB1Q9HAE3 211 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 OXSMQ9NWU1 459 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 REV1Q9UBZ9 1251 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 OPN4Q9UHM6 478 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 MMP24Q9Y5R2 645 aa10.27□□□□□ -0.77
RFPL3-201ENST00000249007 WDR91A4D1P6 747 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 OR6C65A6NJZ3 312 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 TIMM23O14925 209 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 SYNGR3O43761 229 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 UPK1BO75841 260 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 OR4F21O95013 312 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 IGLV1-44P01699 117 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 INHBAP08476 426 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 TCN1P20061 433 aaPredicted RBP10.26□□□□□ -0.77
RFPL3-201ENST00000249007 CD247P20963 164 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 CLK1P49759 484 aaKnown RBP10.26□□□□□ -0.77
RFPL3-201ENST00000249007 PRKAA2P54646 552 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 CDH13P55290 713 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 MERTKQ12866 999 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 CBFBQ13951 182 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 GNA13Q14344 377 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 GK3PQ14409 553 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 C3orf36Q3SXR2 165 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 ZFP69Q49AA0 526 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 TECRLQ5HYJ1 363 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFPL3-201ENST00000249007 SAXO2Q658L1 398 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 Q6ZPA2 131 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 KCTD8Q6ZWB6 473 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 CYS1Q717R9 158 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 RETREG3Q86VR2 466 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 ZNF614Q8N883 585 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 OR6Q1Q8NGQ2 317 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 OR6F1Q8NGZ6 308 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 DNAJA3Q96EY1 480 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 GPA33Q99795 319 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 ZNF416Q9BWM5 594 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 MS4A5Q9H3V2 200 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 TMEM45AQ9NWC5 275 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 ZNF229Q9UJW7 825 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 ZNF225Q9UK10 706 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 FLVCR1Q9Y5Y0 555 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 AUP1Q9Y679 476 aa10.26□□□□□ -0.77
RFPL3-201ENST00000249007 TCRBV3S1A0A5B6 114 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 CLDN34H7C241 214 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ANGPT2O15123 496 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 DNPH1O43598 174 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ULK1O75385 1050 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 PMS2P2O95744 297 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ECDO95905 644 aaPredicted RBP10.25□□□□□ -0.77
RFPL3-201ENST00000249007 APOA1P02647 267 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 PCGF2P35227 344 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 RPS5P46782 204 aaKnown RBP10.25□□□□□ -0.77
RFPL3-201ENST00000249007 POU6F2P78424 691 aaPredicted RBP10.25□□□□□ -0.77
RFPL3-201ENST00000249007 MRPS15P82914 257 aaKnown RBP10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ZNF45Q02386 682 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 KLF10Q13118 480 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 CLVS2Q5SYC1 327 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 REP15Q6BDI9 236 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 FAM71E1Q6IPT2 247 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ZBTB49Q6ZSB9 765 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 RHOUQ7L0Q8 258 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 SETD6Q8TBK2 473 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ST8SIA1Q92185 356 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 YIPF5Q969M3 257 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 C16orf58Q96GQ5 468 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 RDH12Q96NR8 316 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 CITED1Q99966 193 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 RBM4BQ9BQ04 359 aaKnown RBP10.25□□□□□ -0.77
RFPL3-201ENST00000249007 CHID1Q9BWS9 393 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 BTBD2Q9BX70 525 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 ACOXLQ9NUZ1 547 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 MID2Q9UJV3 735 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 CMAHPQ9Y471 501 aa10.25□□□□□ -0.77
RFPL3-201ENST00000249007 A0A096LPK6 155 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms