RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 OR5V1Q9UGF6 321 aa14.59□□□□□ -0.07
UBE3D-201ENST00000237186 ASXL3Q9C0F0 2248 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 IGHV3-20A0A0C4DH32 117 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 SLC22A23A1A5C7 686 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 CENPBD1B2RD01 187 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 GABARAPH6UMI1 98 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 ETV2O00321 342 aaPredicted RBP14.58□□□□□ -0.08
UBE3D-201ENST00000237186 GPR171O14626 319 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 ADRB1P08588 477 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 MRPS10P82664 201 aaKnown RBP14.58□□□□□ -0.08
UBE3D-201ENST00000237186 MAB21L1Q13394 359 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 TNK1Q13470 666 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 SLC17A1Q14916 467 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 TEX30Q5JUR7 227 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 LRRN1Q6UXK5 716 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 MAMSTRQ6ZN01 415 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 SHISA6Q6ZSJ9 500 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 DND1Q8IYX4 353 aaKnown RBP14.58□□□□□ -0.08
UBE3D-201ENST00000237186 OR8K3Q8NH51 312 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 ZFAND1Q8TCF1 268 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 C15orf40Q8WUR7 153 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 HGDQ93099 445 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 HAVCR1Q96D42 359 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 S100A16Q96FQ6 103 aaKnown RBP14.58□□□□□ -0.08
UBE3D-201ENST00000237186 SMAD5Q99717 465 aaKnown RBP14.58□□□□□ -0.08
UBE3D-201ENST00000237186 CACNG6Q9BXT2 260 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 SLC7A5P2Q9GIP4 190 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 KCNG2Q9UJ96 466 aa14.58□□□□□ -0.08
UBE3D-201ENST00000237186 LY6G6EA0A0G2JKS1 128 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 NPIPB13A6NJU9 1138 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 NPIPB4C9JG80 1138 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 FAM47E-STBD1D6RA91 191 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF593O00488 134 aaPredicted RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ALOX12BO75342 701 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 OR6A2O95222 327 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 SNTB2Q13425 540 aaKnown RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 MFSD13AQ14CX5 517 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 SLC18B1Q6NT16 456 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 PRSS45Q7RTY3 260 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF679Q8IYX0 411 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 RNF128Q8TEB7 428 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 MIB2Q96AX9 1013 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 GFM1Q96RP9 751 aaKnown RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 AMELYQ99218 206 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 TMEM246Q9BRR3 403 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ACTR6Q9GZN1 396 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 NUDT15Q9NV35 164 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 MRPL22Q9NWU5 206 aaKnown RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 U3KQA8 63 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 CCDC163A0A0D9SF12 145 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 A0A1B0GTH9 108 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 TMEM200CA6NKL6 621 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 VSTM2BA6NLU5 285 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF354AO60765 605 aaPredicted RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 GPANK1O95872 356 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ECDO95905 644 aaPredicted RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 HEXBP07686 556 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 CSRP1P21291 193 aaKnown RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 TCEA1P23193 301 aaKnown RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 S100A1P23297 94 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 HOXA6P31267 233 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 GDNFP39905 211 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 APOBEC1P41238 236 aaKnown RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 PTH2RP49190 550 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 NR0B2Q15466 257 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 MEP1BQ16820 701 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 BCL2L15Q5TBC7 163 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 BTN2A1Q7KYR7 527 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 PLCZ1Q86YW0 608 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 SLC7A5P1Q8MH63 180 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF676Q8N7Q3 588 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 BMPERQ8N8U9 685 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 MFSD8Q8NHS3 518 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 TTC9Q92623 222 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 C8orf44Q96CB5 159 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 OR2M2Q96R28 347 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF587Q96SQ5 575 aaPredicted RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ELOVL3Q9HB03 270 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 SUSD2Q9UGT4 822 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 ATXN7L1Q9ULK2 861 aaPredicted RBP14.57□□□□□ -0.08
UBE3D-201ENST00000237186 FOXJ3Q9UPW0 622 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
UBE3D-201ENST00000237186 A0A1W2PQM1 296 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 SLC16A7O60669 478 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 LDOC1O95751 146 aaPredicted RBP14.56□□□□□ -0.08
UBE3D-201ENST00000237186 PLGP00747 810 aaPredicted RBP14.56□□□□□ -0.08
UBE3D-201ENST00000237186 CTLA4P16410 223 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 GIFP27352 417 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 CRABP1P29762 137 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 RPS27P42677 84 aaKnown RBP14.56□□□□□ -0.08
UBE3D-201ENST00000237186 KIR3DL2P43630 455 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 SOX2P48431 317 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 MAP2K6P52564 334 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 DCDP81605 110 aaKnown RBP14.56□□□□□ -0.08
UBE3D-201ENST00000237186 Q5BKY6 102 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF385CQ66K41 422 aaPredicted RBP14.56□□□□□ -0.08
UBE3D-201ENST00000237186 GUSBP11Q6P575 273 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 ZNF454Q8N9F8 522 aa14.56□□□□□ -0.08
UBE3D-201ENST00000237186 SAP25Q8TEE9 199 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms