RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 GFI1Q99684 422 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 SRA1Q9HD15 236 aaKnown RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 SLC27A6Q9Y2P4 619 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 SEC16AO15027 2179 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 TRAV18A0A075B6X5 111 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 DOK2O60496 412 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 GAAP10253 952 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 RPA2P15927 270 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 G0S2P27469 103 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 TAS2R20P59543 309 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 NANOS3P60323 173 aaKnown RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 SRSF5Q13243 272 aaKnown RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 ELAVL1Q15717 326 aaKnown RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 LCORQ96JN0 433 aaPredicted RBP12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 GGACTQ9BVM4 153 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 TOLLIPQ9H0E2 274 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 ADAM29Q9UKF5 820 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 TVP23AA6NH52 213 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 RFPL4AA6NLU0 287 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 MCIDASD6RGH6 385 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 RFPL4AL1F8VTS6 287 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 H7C1C5 153 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 VEGFDO43915 354 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 YIF1AO95070 293 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 INHAP05111 366 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 CPMP14384 443 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 LCN6P62502 163 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 ALG10BQ5I7T1 473 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 DCST2Q5T1A1 773 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 PRAMEF17Q5VTA0 474 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 NRROSQ86YC3 692 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 MISPQ8IVT2 679 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF561Q8N587 486 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 STEAP2Q8NFT2 490 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 OR4C16Q8NGL9 310 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM41AQ96HV5 264 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 UQCC1Q9NVA1 299 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 NCDNQ9UBB6 729 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 CES1P1Q9UKY3 287 aa12.92□□□□□ -0.34
PCDHB3-201ENST00000231130 TRAV1-2A0A0B4J238 106 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 A0A0B4J2A0 478 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 EEF1E1-BLOC1S5C9J1V9 151 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 H7C1Q1 480 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 RHOP08100 348 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 ABOP16442 354 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 SPI1P17947 270 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 GFOD2Q3B7J2 385 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 UQCC3Q6UW78 93 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 OR51D1Q8NGF3 324 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 Q96M85 177 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 LMF1Q96S06 567 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 UNKLQ9H9P5 680 aaKnown RBP12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 WBP1LQ9NX94 342 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 SHPKQ9UHJ6 478 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 FOXJ3Q9UPW0 622 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 FARSAQ9Y285 508 aaKnown RBP12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 TMEM72A0PK05 275 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 TBC1D3BA6NDS4 549 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 PNLIPRP2P54317 469 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 F2RL1P55085 397 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 ACTC1P68032 377 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 ACTA1P68133 377 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 SCGB2B2Q4G0G5 96 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 SKA3Q8IX90 412 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 ETFBKMTQ8IXQ9 262 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 OR4K14Q8NGD5 310 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 GTF3AQ92664 365 aaKnown RBP12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF681Q96N22 645 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 ZNF223Q9UK11 482 aaPredicted RBP12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
PCDHB3-201ENST00000231130 C13orf42A0A1B0GVH6 325 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 A0A1B0GWA3 101 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 LAP3P28838 519 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 SP3Q02447 781 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 PWWP2BQ6NUJ5 590 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 C3orf33Q6P1S2 294 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 GLB1L2Q8IW92 636 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 GATSQ8NAP1 163 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 OR5T3Q8NGG3 340 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 OR10AC1Q8NH08 325 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 OR10G6Q8NH81 332 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 MENTQ9BUN1 341 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 ANKRD10Q9NXR5 420 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 HIDE1A8MVS5 230 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 IL5P05113 134 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 NGFRP08138 427 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 SLC6A6P31641 620 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 CTNNB1P35222 781 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 ACTR1AP61163 376 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 ARHGAP19Q14CB8 494 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 EIPR1Q53HC9 387 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 BAIAP2L2Q6UXY1 529 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 CASTOR1Q8WTX7 329 aa12.9□□□□□ -0.34
PCDHB3-201ENST00000231130 MOAP1Q96BY2 351 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms