RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 MTFP1Q9UDX5 166 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 AK4P27144 223 aaPredicted RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 CASRP41180 1078 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 BTN3A2P78410 334 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 NKPD1Q17RQ9 610 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 MRPL2Q5T653 305 aaKnown RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 RPL22L1Q6P5R6 122 aaKnown RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 FIGNL1Q6PIW4 674 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 KRT77Q7Z794 578 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 ZNF761Q86XN6 746 aaPredicted RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 INTS12Q96CB8 462 aaKnown RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 HSPA12BQ96MM6 686 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 TSSK2Q96PF2 358 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 NMNAT3Q96T66 252 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 CNN2Q99439 309 aaKnown RBP12.82□□□□□ -0.36
SF1-201ENST00000227503 GAREM1Q9H706 876 aa12.82□□□□□ -0.36
SF1-201ENST00000227503 A0A0B4J2A0 478 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 A0A0D9SG52 128 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 YKT6O15498 198 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 FOSL1P15407 271 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 AVPR2P30518 371 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 NR0B1P51843 470 aaKnown RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 PDGFRLQ15198 375 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 ELAVL1Q15717 326 aaKnown RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 GFOD2Q3B7J2 385 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 C11orf87Q6NUJ2 197 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 DMBX1Q8NFW5 382 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 RELTQ969Z4 430 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 ISOC2Q96AB3 205 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 CLCC1Q96S66 551 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 RSPH9Q9H1X1 276 aaPredicted RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 SHPKQ9UHJ6 478 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 GPN3Q9UHW5 284 aaPredicted RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 SLC17A4Q9Y2C5 497 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 TMEM82A0PJX8 343 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 PMS2P1A4D2B8 440 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 TRAPPC13A5PLN9 417 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 COLCA2A8K830 154 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 RCBTB2O95199 551 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 KLK3P07288 261 aaPredicted RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 NGFRP08138 427 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 ZNF44P15621 663 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 FAUP35544 74 aaKnown RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 ACTC1P68032 377 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 ACTA1P68133 377 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 TCEA2Q15560 299 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 DUSP5Q16690 384 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 EIF2S3LQ2VIR3 472 aaKnown RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 TMEM205Q6UW68 189 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 TMPPEQ6ZT21 453 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 VN1R4Q7Z5H5 301 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 TMEM200AQ86VY9 491 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 ZNF511Q8NB15 262 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 MTHFD2LQ9H903 347 aaPredicted RBP12.81□□□□□ -0.36
SF1-201ENST00000227503 MBD2Q9UBB5 411 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 KCNE5Q9UJ90 142 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 IER3IP1Q9Y5U9 82 aa12.81□□□□□ -0.36
SF1-201ENST00000227503 A0A0A6YYC8 382 aaPredicted RBP12.8□□□□□ -0.36
SF1-201ENST00000227503 A0A1W2PP55 124 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 I3L1I5 382 aaPredicted RBP12.8□□□□□ -0.36
SF1-201ENST00000227503 SMIM6P0DI80 62 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 MAPK3P27361 379 aaPredicted RBP12.8□□□□□ -0.36
SF1-201ENST00000227503 PEA15Q15121 130 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 NKAIN2Q5VXU1 208 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 OR4K14Q8NGD5 310 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 LMF1Q96S06 567 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 MYADMQ96S97 322 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 MAP3K3Q99759 626 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 PAPOLGQ9BWT3 736 aaKnown RBP12.8□□□□□ -0.36
SF1-201ENST00000227503 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 WBP1LQ9NX94 342 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 COMMD9Q9P000 198 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 HEATR5AQ86XA9 2040 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 SULT2B1O00204 365 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 SULT1B1O43704 296 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 SNAPINO95295 136 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 DAOP14920 347 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 NQO2P16083 231 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 ZNF28P17035 718 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 CMPK1P30085 196 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 SDHAP31040 664 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 F2RL1P55085 397 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 RAB5BP61020 215 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
SF1-201ENST00000227503 DHRS2Q13268 280 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 CDPF1Q6NVV7 123 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 STEAP1BQ6NZ63 245 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 UNQ9370/PRO34162Q6UXP9 181 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 OR2L13Q8N349 312 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 CASTOR1Q8WTX7 329 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 UQCC1Q9NVA1 299 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 EPHA6Q9UF33 1036 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 ZNF281Q9Y2X9 895 aa12.8□□□□□ -0.36
SF1-201ENST00000227503 LINC01553A4QN01 128 aa12.79□□□□□ -0.36
SF1-201ENST00000227503 MCIDASD6RGH6 385 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms