RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SEMA6DQ8NFY4 1073 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CT45A3Q8NHU0 189 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 C17orf112F2Z3M2 114 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 FGF17O60258 216 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 MED6O75586 246 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 UBBP0CG47 229 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 SNRPBP14678 240 aaKnown RBP17.4■□□□□ 0.38
SMPD3-201ENST00000219334 GPX2P18283 190 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 THBS3P49746 956 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 RAB11AP62491 216 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 HSF1Q00613 529 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 CMPK2Q5EBM0 449 aa17.4■□□□□ 0.38
SMPD3-201ENST00000219334 DEGS1O15121 323 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 SMIM15Q7Z3B0 74 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 TMEM185AQ8NFB2 350 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 LINC01599Q8WXQ3 324 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 TAAR9Q96RI9 348 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 IER2Q9BTL4 223 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 ANKRD12Q6UB98 2062 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 CNIH1O95406 144 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 IGLV3-27P01718 113 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 NID1P14543 1247 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 GPR3P46089 330 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 OLIG3Q7RTU3 272 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 NAXDQ8IW45 347 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 RBMXL1Q96E39 390 aaKnown RBP17.39■□□□□ 0.37
SMPD3-201ENST00000219334 SEMA4GQ9NTN9 838 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 WDR37Q9Y2I8 494 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 TIMM10BQ9Y5J6 103 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 ZNF674Q2M3X9 581 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 PLK5Q496M5 336 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 OR5AS1Q8N127 324 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 SLAMF9Q96A28 289 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 EMC6Q9BV81 110 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 C20orf27Q9GZN8 174 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 PLCXD1Q9NUJ7 323 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 C1orf123Q9NWV4 160 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 ASIC5Q9NY37 505 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 ZNF728P0DKX0 622 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 SDHBP21912 280 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 AGFG1P52594 562 aaKnown RBP17.39■□□□□ 0.37
SMPD3-201ENST00000219334 LSAMPQ13449 338 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 ARHGAP11BQ3KRB8 267 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 YIF1BQ5BJH7 314 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 CGB2Q6NT52 195 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 KCNE4Q8WWG9 221 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 TSLPQ969D9 159 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 UBQLN3Q9H347 655 aa17.39■□□□□ 0.37
SMPD3-201ENST00000219334 RP1L1Q8IWN7 2480 aaPredicted RBP17.39■□□□□ 0.37
SMPD3-201ENST00000219334 LMO7DNF2Z398 122 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 EFSO43281 561 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 DCLRE1CQ96SD1 692 aaKnown RBP17.38■□□□□ 0.37
SMPD3-201ENST00000219334 SDF2Q99470 211 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 PCED1AQ9H1Q7 454 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 C5P01031 1676 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 KLK10O43240 276 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 RBMS3Q6XE24 437 aaKnown RBP17.38■□□□□ 0.37
SMPD3-201ENST00000219334 KIRREL1Q96J84 757 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 PRR14Q9BWN1 585 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 TMEM82A0PJX8 343 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 ARR3P36575 388 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 CCR2P41597 374 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 TEKQ02763 1124 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 PRTGQ2VWP7 1150 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 PFDN5Q99471 154 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 WNT16Q9UBV4 365 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 NCR1O76036 304 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 GNB3P16520 340 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 BCKDHBP21953 392 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 TNFSF8P32971 234 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 GFERP55789 205 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 HYAL1Q12794 435 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 CLN3Q13286 438 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 SHEQ5VZ18 495 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 SHARPINQ9H0F6 387 aa17.38■□□□□ 0.37
SMPD3-201ENST00000219334 PIP5K1CO60331 668 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 ZGLP1P0C6A0 271 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 GSK3AP49840 483 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 FAPQ12884 760 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 NOXA1Q86UR1 476 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 AMBRA1Q9C0C7 1298 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 SSUH2Q9Y2M2 353 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 MYO18AQ92614 2054 aaKnown RBP17.37■□□□□ 0.37
SMPD3-201ENST00000219334 CLDN24A6NM45 220 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 APOA2P02652 100 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 ZNF133P52736 654 aaPredicted RBP17.37■□□□□ 0.37
SMPD3-201ENST00000219334 ADPRMQ3LIE5 342 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 IDO2Q6ZQW0 420 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 Q6ZS52 159 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 ZNF767PQ75MW2 155 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 LAT2Q9GZY6 243 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 RPH3ALQ9UNE2 315 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 CLDN1O95832 211 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 THBS1P07996 1170 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 TRIM23P36406 574 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 HTR2BP41595 481 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 RBMS2Q15434 407 aaKnown RBP17.37■□□□□ 0.37
SMPD3-201ENST00000219334 CA13Q8N1Q1 262 aa17.37■□□□□ 0.37
SMPD3-201ENST00000219334 UTP4Q969X6 686 aaKnown RBP17.37■□□□□ 0.37
SMPD3-201ENST00000219334 IL21Q9HBE4 155 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms