RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SDR16C5Q8N3Y7 309 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 PRSS35Q8N3Z0 413 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 ZNF615Q8N8J6 731 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 OR51D1Q8NGF3 324 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 ZNF417Q8TAU3 575 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 LIPHQ8WWY8 451 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 KTI12Q96EK9 354 aaPredicted RBP15.66■□□□□ 0.1
USB1-201ENST00000219281 DNAJA3Q96EY1 480 aa15.66■□□□□ 0.1
USB1-201ENST00000219281 ELF4Q99607 663 aaPredicted RBP15.66■□□□□ 0.1
USB1-201ENST00000219281 UBE2QL1A1L167 161 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 MEIS3P1A6NDR6 274 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 ARPC5O15511 151 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 HIST1H2ABP04908 130 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 UBL4AP11441 157 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 MST1P26927 711 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 SEC61A1P61619 476 aaKnown RBP15.65■□□□□ 0.1
USB1-201ENST00000219281 GUCA2AQ02747 115 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 SKP2Q13309 424 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 HLXQ14774 488 aaPredicted RBP15.65■□□□□ 0.1
USB1-201ENST00000219281 PRTGQ2VWP7 1150 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 LRRC69Q6ZNQ3 347 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 HIST3H2AQ7L7L0 130 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 GPR148Q8TDV2 347 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 HIST1H2ACQ93077 130 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 CXorf58Q96LI9 332 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 KLHL15Q96M94 604 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 KLHDC3Q9BQ90 382 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 REG4Q9BYZ8 158 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 SDHAF2Q9NX18 166 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 GMFGO60234 142 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 ZNF432O94892 652 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 ALOX5APP20292 161 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 DLX5P56178 289 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 H2BFSP57053 126 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 DMWDQ09019 674 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 RIPPLY1Q0D2K3 151 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 FNDC7Q5VTL7 733 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 COQ8AQ8NI60 647 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 PNPLA2Q96AD5 504 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 CCNL2Q96S94 520 aaPredicted RBP15.65■□□□□ 0.1
USB1-201ENST00000219281 AMELYQ99218 206 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 SYT4Q9H2B2 425 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 KCNK15Q9H427 330 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 SLCO1B1Q9Y6L6 691 aa15.65■□□□□ 0.1
USB1-201ENST00000219281 GGT3PA6NGU5 568 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 OR6C65A6NJZ3 312 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 TMEM212A6NML5 194 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 CTAG2O75638 210 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 TXNDC12O95881 172 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 CLPSP04118 112 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 FBXO45P0C2W1 286 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 ANKRD16Q6P6B7 361 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 ALKAL2Q6UX46 152 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 TMUB2Q71RG4 321 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 PRSS42Q7Z5A4 293 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 ZSCAN1Q8NBB4 408 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 LINC00052Q96N35 136 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 UBQLN4Q9NRR5 601 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 OPN4Q9UHM6 478 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 OR5K4A6NMS3 321 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 POM121CA8CG34 1229 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 GOSR2O14653 212 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 RENP00797 406 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 CSF1P09603 554 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 ZNF35P13682 527 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 S100A11P31949 105 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 KIR3DL2P43630 455 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 BIVMQ86UB2 503 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 TSEN15Q8WW01 171 aaKnown RBP15.64■□□□□ 0.09
USB1-201ENST00000219281 MMABQ96EY8 250 aaPredicted RBP15.64■□□□□ 0.09
USB1-201ENST00000219281 INTS14Q96SY0 518 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 KCNMB2Q9Y691 235 aa15.64■□□□□ 0.09
USB1-201ENST00000219281 TRAV18A0A075B6X5 111 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 FXYD6-FXYD2A0A087WZ82 144 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 MFSD2BA6NFX1 497 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 RAD1O60671 282 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 TPPPO94811 219 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 IGF2P01344 180 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 PROS1P07225 676 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 GTF2F2P13984 249 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 POU3F4P49335 361 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 MAP2K6P52564 334 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 TAGLNQ01995 201 aaKnown RBP15.63■□□□□ 0.09
USB1-201ENST00000219281 EGR3Q06889 387 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 EIF2B5Q13144 721 aaKnown RBP15.63■□□□□ 0.09
USB1-201ENST00000219281 WDR38Q5JTN6 314 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 NKAIN2Q5VXU1 208 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 RGS7BPQ6MZT1 257 aaPredicted RBP15.63■□□□□ 0.09
USB1-201ENST00000219281 PM20D2Q8IYS1 436 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 ZNF321PQ8N8H1 164 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 OR51S1Q8NGJ8 323 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 ZNF563Q8TA94 476 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 ATOH1Q92858 354 aaPredicted RBP15.63■□□□□ 0.09
USB1-201ENST00000219281 TAAR8Q969N4 342 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 TOE1Q96GM8 510 aaKnown RBP15.63■□□□□ 0.09
USB1-201ENST00000219281 FOXN4Q96NZ1 517 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 NKX3-1Q99801 234 aaPredicted RBP15.63■□□□□ 0.09
USB1-201ENST00000219281 FXYD6Q9H0Q3 95 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 KCNG2Q9UJ96 466 aa15.63■□□□□ 0.09
USB1-201ENST00000219281 CDV3Q9UKY7 258 aaKnown RBP15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms