RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ULBP2Q9BZM5 246 aa24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 NDRG4Q9ULP0 352 aaKnown RBP24.06■■□□□ 1.44
CHMP4B-201ENST00000217402 OR6C65A6NJZ3 312 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 FAM90A27PA6NNH2 459 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 E9PQ18 207 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 RENP00797 406 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 LINGO2Q7L985 606 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 ASB5Q8WWX0 329 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 OTULINQ96BN8 352 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 LRR1Q96L50 414 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 PITX2Q99697 317 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 LINC00470Q9BZP3 86 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 B3GAT2Q9NPZ5 323 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 RPRD1BQ9NQG5 326 aaKnown RBP24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 MALT1Q9UDY8 824 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 PCNX1Q96RV3 2341 aa24.05■■□□□ 1.44
CHMP4B-201ENST00000217402 OR6C68A6NDL8 312 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 FAM183AA6NL82 134 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 CENPBD1B2RD01 187 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 H0YJX3 145 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 SLC16A6O15403 523 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 PRKYO43930 277 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 CLIC3O95833 236 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 QDPRP09417 244 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 CDC42P60953 191 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 ITGADQ13349 1161 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 HIST3H3Q16695 136 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 MCHR2Q969V1 340 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 TSSK2Q96PF2 358 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 RERGLQ9H628 205 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 CRLF2Q9HC73 371 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 IMPAD1Q9NX62 359 aa24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 VSX1Q9NZR4 365 aaPredicted RBP24.04■■□□□ 1.44
CHMP4B-201ENST00000217402 MSTNO14793 375 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 PCYT1AP49585 367 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 ROR2Q01974 943 aaKnown RBP24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 C6orf52Q5T4I8 152 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 C9orf135Q5VTT2 229 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 LRFN4Q6PJG9 635 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 MRGPRGQ86SM5 289 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 TCEANCQ8N8B7 351 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 OR9Q1Q8NGQ5 310 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 NSMAFQ92636 917 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 RBP7Q96R05 134 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 IL4I1Q96RQ9 567 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 ASB6Q9NWX5 421 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 FREM1Q5H8C1 2179 aa24.03■■□□□ 1.44
CHMP4B-201ENST00000217402 IGKV1D-43A0A0B4J1Z2 117 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 ZNF587BE7ETH6 402 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 J3QKU1 62 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 CAPGP40121 348 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 FOXG1P55316 489 aaPredicted RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 ADARB1P78563 741 aaKnown RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 KEAP1Q14145 624 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 CDSNQ15517 529 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 TTC23Q5W5X9 447 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 ZNF474Q6S9Z5 364 aaPredicted RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 CA5BP1Q8WTZ4 195 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 NMD3Q96D46 503 aaKnown RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 ZNF837Q96EG3 531 aaPredicted RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 NUAK2Q9H093 628 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 MED20Q9H944 212 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 GPR35Q9HC97 309 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 DIDO1Q9BTC0 2240 aaKnown RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 NCOA6Q14686 2063 aaPredicted RBP24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 SLC16A7O60669 478 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 NR2C1P13056 603 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 CTLA4P16410 223 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 THEM4Q5T1C6 240 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 PLBD1Q6P4A8 553 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 Q6ZT83 130 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 UBE2FQ969M7 185 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 SNX18Q96RF0 628 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 HCAR1Q9BXC0 346 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 MYO18BQ8IUG5 2567 aa24.02■■□□□ 1.44
CHMP4B-201ENST00000217402 A8MXE2 369 aa24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 TLX2O43763 284 aaPredicted RBP24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 AHCYL1O43865 530 aa24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 PAICSP22234 425 aaKnown RBP24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 CEACAM16Q2WEN9 425 aa24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 SLC25A35Q3KQZ1 300 aa24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 BEND4Q6ZU67 534 aa24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 ITLN2Q8WWU7 325 aaPredicted RBP24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 DDOQ99489 341 aa24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 RBM24Q9BX46 236 aaKnown RBP24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 SRA1Q9HD15 236 aaKnown RBP24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 HINT3Q9NQE9 182 aaKnown RBP24.01■■□□□ 1.43
CHMP4B-201ENST00000217402 PRR23D1E9PI22 279 aaPredicted RBP24■■□□□ 1.43
CHMP4B-201ENST00000217402 DCTN6O00399 190 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 GYPBP06028 91 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 PRR23D2P0DMB1 279 aaPredicted RBP24■■□□□ 1.43
CHMP4B-201ENST00000217402 ABHD12BQ7Z5M8 362 aaPredicted RBP24■■□□□ 1.43
CHMP4B-201ENST00000217402 CPOQ8IVL8 374 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 GABRG1Q8N1C3 465 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 LILRB4Q8NHJ6 448 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 TMEM163Q8TC26 289 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 FNDC8Q8TC99 324 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 TFAP2CQ92754 450 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 JKAMPQ9P055 326 aa24■■□□□ 1.43
CHMP4B-201ENST00000217402 UBR5O95071 2799 aaPredicted RBP23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms