RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Rbm45Q8BHN5 476 aaKnown RBP11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Adgrg3Q8R0T6 542 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1086Q8VFL9 310 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 BC049352E9Q2Z6 85 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cfhr2Q4LDF6 332 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ccdc116Q80X53 541 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sgip1Q8VD37 806 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrgpra3Q91WW3 302 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cdca5Q9CPY3 264 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem216Q9CQC4 141 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Coq5Q9CXI0 327 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Trex2Q9R1A9 236 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 ClcnkaQ9WUB7 687 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr517Q7TRU4 314 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hrasls5Q9CPX5 270 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cldnd2Q9D9H2 167 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Sorcs2Q9EPR5 1159 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 SrpxQ9R0M3 464 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f15A0A087WR44 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f12A0A0A0MQP3 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f9A2BFZ7 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f7A2BHG6 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f19A2CG71 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f10A2CG92 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f3A2CGC2 496 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cd101A8E0Y8 1033 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f13B8JKF6 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f2J3QMS5 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f25J3QMV9 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f6J3QMW9 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f26J3QNK2 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f24J3QNQ5 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f8J3QQ50 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f17L7MU81 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f18L7MU83 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Kcnj8P97794 424 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f14Q1LZI5 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lyg2Q3V1I0 213 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Btbd35f27Q5FWA1 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fbxo48Q8CAT8 161 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r33Q8R2E0 305 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem106aQ8VC04 261 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 EpcamQ99JW5 315 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 GMCL1P1Q99N64 498 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hnrnpa2b1O88569 353 aaKnown RBP11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ap1g1P22892 822 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Ikzf1Q03267 517 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lrrc30Q3UV48 300 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 N4bp2l1Q3V2Q8 238 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 PiglQ5SX19 252 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Kmt5cQ6Q783 468 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc25a21Q8BZ09 298 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r192Q8K4C9 300 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Plpp6Q9D4F2 292 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Siglec1Q62230 1695 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm15446D3Z5Y8 553 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr555E9Q547 315 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pias3O54714 628 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Syngr1O55100 234 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 VaspP70460 375 aaKnown RBP11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Slc35c1Q8BLX4 363 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tspan11Q9D1D1 253 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gm21834J3QN05 151 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Wnt9bO35468 359 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gstm6O35660 218 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 NraddQ8CJ26 228 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr1417Q8VGJ6 315 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 CytipQ91VY6 359 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Trp53tg5Q9D976 238 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Phlda2O08969 144 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Znf865Q3U3I9 1058 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp819Q80V81 607 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lmo3Q8BZL8 145 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zbtb37Q8C3U9 504 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Pex12Q8VC48 359 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hyal3Q8VEI3 412 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Cwh43Q91YL7 699 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mrgpra7Q91ZC5 305 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Yif1bQ9CX30 311 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Yae1d1Q9DAY6 216 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Timm8a1Q9WVA2 97 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r10W4VSP8 311 aa11.13□□□□□ -0.63
Trim56-201ENSMUST00000054384 Atrnl1Q6A051 1378 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Lancl1O89112 399 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Acp2P24638 423 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Gnb4P29387 340 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 P2rx3Q3UR32 397 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp273Q7M6W8 501 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Zfp85Q7TMC9 473 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tmem11Q8BK08 190 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Fate1Q8CEK7 99 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 NagsQ8R4H7 527 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr398Q8VFY0 314 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Olfr551Q8VG23 315 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Prl8a1Q9DAV8 240 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Nxt1Q9QZV9 140 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Hs3st4D3YVV6 449 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Vmn1r88E9Q235 316 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Tnfsf10P50592 291 aa11.12□□□□□ -0.63
Trim56-201ENSMUST00000054384 Mmp25Q3U435 615 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms