RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GPBAR1Q8TDU6 330 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 AMELYQ99218 206 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 LPAR4Q99677 370 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 KCNK15Q9H427 330 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 OR4C45A6NMZ5 311 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 A8MUA0 341 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 CREBL2O60519 120 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 TACSTD2P09758 323 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 NFYAP23511 347 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 TPMTP51580 245 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 DHODHQ02127 395 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 DNM1P46Q6ZS02 220 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 CDC20BQ86Y33 519 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 MCATQ8IVS2 390 aaKnown RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 TMEM106AQ96A25 262 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 KTI12Q96EK9 354 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 ELF4Q99607 663 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 UTP23Q9BRU9 249 aaKnown RBP12.56□□□□□ -0.4
PHGDH-233ENST00000642021 MMP25Q9NPA2 562 aa12.56□□□□□ -0.4
PHGDH-233ENST00000642021 L7N2F9 121 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 PRAMEF2O60811 474 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 GIPP09681 153 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-233ENST00000642021 SLC25A1P53007 311 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 H2BFSP57053 126 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 DMWDQ09019 674 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 MESTQ5EB52 335 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 C3P1Q6ZMU1 363 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 LRRC69Q6ZNQ3 347 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 FAM220AQ7Z4H9 259 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 PARGQ86W56 976 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 ZNF615Q8N8J6 731 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 OR5M1Q8NGP8 315 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 RBPMSQ93062 196 aaKnown RBP12.55□□□□□ -0.4
PHGDH-233ENST00000642021 DGAT2Q96PD7 388 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 PRTFDC1Q9NRG1 225 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 TMEM184BQ9Y519 407 aaPredicted RBP12.55□□□□□ -0.4
PHGDH-233ENST00000642021 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 C17orf51A8MQB3 221 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 GMFGO60234 142 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 ACSM4P0C7M7 580 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 ASAH2BP0C7U1 165 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 RNH1P13489 461 aaKnown RBP12.55□□□□□ -0.4
PHGDH-233ENST00000642021 SDHAP31040 664 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
PHGDH-233ENST00000642021 GRM7Q14831 915 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 PCGF3Q3KNV8 242 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 MED25Q71SY5 747 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 GPAT4Q86UL3 456 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 ADGRG3Q86Y34 549 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 OR51D1Q8NGF3 324 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 OR4C16Q8NGL9 310 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 OR6N2Q8NGY6 317 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 TSPAN32Q96QS1 320 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 REG4Q9BYZ8 158 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 SLC19A3Q9BZV2 496 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 SLITRK2Q9H156 845 aa12.55□□□□□ -0.4
PHGDH-233ENST00000642021 CLPSP04118 112 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 IFNA16P05015 189 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 IL5P05113 134 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 FBXO45P0C2W1 286 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 PBX2P40425 430 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 RPL18Q07020 188 aaKnown RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 FUT7Q11130 342 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 PRTGQ2VWP7 1150 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 FAM198BQ6UWH4 519 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 SLC36A1Q7Z2H8 476 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 KCTD20Q7Z5Y7 419 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 PHOSPHO1Q8TCT1 267 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ZDHHC1Q8WTX9 485 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 FOXN4Q96NZ1 517 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 SEMA6CQ9H3T2 930 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 LAMP5Q9UJQ1 280 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 YBX2Q9Y2T7 364 aaKnown RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 KCNMB2Q9Y691 235 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ANXA2P2A6NMY6 339 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 POM121CA8CG34 1229 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 SUSD5O60279 629 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 RAD1O60671 282 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 KDM4BO94953 1096 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 WISP1O95388 367 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ANXA2P07355 339 aaKnown RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ALOX5APP20292 161 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 CTHP32929 405 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 MNDAP41218 407 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 PSMD4P55036 377 aaKnown RBP12.54□□□□□ -0.4
PHGDH-233ENST00000642021 RAP2BP61225 183 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 FNDC7Q5VTL7 733 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 WBP2NLQ6ICG8 309 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 TAF8Q7Z7C8 310 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 OOSP2Q86WS3 158 aa12.54□□□□□ -0.4
PHGDH-233ENST00000642021 ZNF595Q8IYB9 648 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms