RNA–Protein interactions for RNA: ENST00000639071.1

NECAP1-215, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-215ENST00000639071 LAMP5Q9UJQ1 280 aa8.54□□□□□ -1.04
NECAP1-215ENST00000639071 RWDD3Q9Y3V2 267 aa8.54□□□□□ -1.04
NECAP1-215ENST00000639071 LOC100509620A0A075B734 347 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PLATP00750 562 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CALCBP10092 127 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 GABRA1P14867 456 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 NAGAP17050 411 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CTRB1P17538 263 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ACHEP22303 614 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CCKBRP32239 447 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 GRK6P43250 576 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 EPHA4P54764 986 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PRMT2P55345 433 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 DHODHQ02127 395 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ALG10Q5BKT4 473 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TMEM196Q5HYL7 178 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CTRB2Q6GPI1 263 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ZCCHC12Q6PEW1 402 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 NDUFAF7Q7L592 441 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SLC36A1Q7Z2H8 476 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ZNF550Q7Z398 422 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ZNF227Q86WZ6 799 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PLPP7Q8NBV4 271 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SCARB1Q8WTV0 552 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 MRPL48Q96GC5 212 aaKnown RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TOE1Q96GM8 510 aaKnown RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CMTM3Q96MX0 182 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 MFRPQ9BY79 579 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 EXOSC3Q9NQT5 275 aaKnown RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PRDM9Q9NQV7 894 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ZNF275Q9NSD4 429 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 FBXL3Q9UKT7 428 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CDV3Q9UKY7 258 aaKnown RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ERVK-19Q9WJR5 959 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TDRD6O60522 2096 aaKnown RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SNRPGP15A8MWD9 76 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 C11orf98E9PRG8 122 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 M0QYG6 137 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TNFSF14O43557 240 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SULT1B1O43704 296 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PLGP00747 810 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 EGFP01133 1207 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 HLA-DQA2P01906 255 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TACSTD2P09758 323 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SLC35E2P0CK97 266 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PPP3CBP16298 524 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 POU3F4P49335 361 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SQSTM1Q13501 440 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 GRM7Q14831 915 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ATXN7L3Q14CW9 347 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 CD226Q15762 336 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ITPRIPL2Q3MIP1 535 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 C1orf53Q5VUE5 145 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 B3GNTL1Q67FW5 361 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 ZNF660Q6AZW8 331 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TSSK4Q6SA08 328 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 TMEM205Q6UW68 189 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 LRRN1Q6UXK5 716 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SLC16A9Q7RTY1 509 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 PRSS35Q8N3Z0 413 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 BCORP1Q8N888 145 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 OR1S1Q8NH92 325 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 BAHD1Q8TBE0 780 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 WDR92Q96MX6 357 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 VSTM2LQ96N03 204 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 GAS2L1Q99501 681 aaPredicted RBP8.53□□□□□ -1.04
NECAP1-215ENST00000639071 MFFQ9GZY8 342 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SHARPINQ9H0F6 387 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 SYT4Q9H2B2 425 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 MED11Q9P086 117 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 FBXO4Q9UKT5 387 aa8.53□□□□□ -1.04
NECAP1-215ENST00000639071 GGT3PA6NGU5 568 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 SERINC4A6NH21 518 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 PCP4L1A6NKN8 68 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 H7C417 338 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 K7EQS6 105 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 XRCC3O43542 346 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 KCNJ13O60928 360 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 CTAG2O75638 210 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 APBB3O95704 486 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 ITGA5P08648 1049 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 PPM1FP49593 454 aaPredicted RBP8.52□□□□□ -1.05
NECAP1-215ENST00000639071 NFATC4Q14934 902 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 SLC35D3Q5M8T2 416 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 ZNF627Q7L945 461 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 EID2Q8N6I1 236 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 OR52H1Q8NGJ2 320 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 OR2G2Q8NGZ5 317 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 C16orf52Q8NHV5 167 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 PHOSPHO1Q8TCT1 267 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 KTI12Q96EK9 354 aaPredicted RBP8.52□□□□□ -1.05
NECAP1-215ENST00000639071 BMFQ96LC9 184 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 PTDSS2Q9BVG9 487 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 ATG5Q9H1Y0 275 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 POFUT1Q9H488 388 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 Q9N2J8 555 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 GRHPRQ9UBQ7 328 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 MTFP1Q9UDX5 166 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 STEAP1Q9UHE8 339 aa8.52□□□□□ -1.05
NECAP1-215ENST00000639071 KCNG2Q9UJ96 466 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms