RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 THBS4P35443 961 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 CLRN1P58418 232 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 RAB1AP62820 205 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 GALK2Q01415 458 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 HGFACQ04756 655 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 SNTB2Q13425 540 aaKnown RBP16.43■□□□□ 0.22
CLN6-213ENST00000636212 CGB2Q6NT52 195 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 NHLRC1Q6VVB1 395 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 LRRC17Q8N6Y2 441 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 RP9Q8TA86 221 aaKnown RBP16.43■□□□□ 0.22
CLN6-213ENST00000636212 TMEM54Q969K7 222 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 SGTBQ96EQ0 304 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 TPD52L3Q96J77 140 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 SORCS2Q96PQ0 1159 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 CCDC134Q9H6E4 229 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 DYNLRB1Q9NP97 96 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 B3GNT2Q9NY97 397 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 RIMS3Q9UJD0 308 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 CMAHPQ9Y471 501 aa16.43■□□□□ 0.22
CLN6-213ENST00000636212 ELOVL7A1L3X0 281 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 ZNF503-AS2A6NEH8 195 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 CCDC22O60826 627 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 IGHG1P01857 330 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 ASAH2BP0C7U1 165 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 OR8G3PP0DMU2 310 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 FUT1P19526 365 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 TNFRSF1BP20333 461 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 KDELR2P33947 212 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 CRYBA2P53672 197 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 RPS23P62266 143 aaKnown RBP16.42■□□□□ 0.22
CLN6-213ENST00000636212 MELKQ14680 651 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 TMEM249Q2WGJ8 235 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 CYBRD1Q53TN4 286 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 GKAP1Q5VSY0 366 aaPredicted RBP16.42■□□□□ 0.22
CLN6-213ENST00000636212 KRT80Q6KB66 452 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 MYPOPQ86VE0 399 aaPredicted RBP16.42■□□□□ 0.22
CLN6-213ENST00000636212 MICU2Q8IYU8 434 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 ZNF540Q8NDQ6 660 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 TMEM239Q8WW34 195 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 RCN3Q96D15 328 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 PRSS27Q9BQR3 290 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 NOX3Q9HBY0 568 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 STX18Q9P2W9 335 aaKnown RBP16.42■□□□□ 0.22
CLN6-213ENST00000636212 MED31Q9Y3C7 131 aa16.42■□□□□ 0.22
CLN6-213ENST00000636212 PLCE1Q9P212 2302 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 LOC390937A0A1W2PQ73 354 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 DHHO43323 396 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 GPRIN2O60269 458 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 OR7A10O76100 309 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 LY6HO94772 140 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 IGF2P01344 180 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 OR1E2P47887 323 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 GIPRP48546 466 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 DAP3P51398 398 aaKnown RBP16.41■□□□□ 0.22
CLN6-213ENST00000636212 ZNF84P51523 738 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 VLDLRP98155 873 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 ST3GAL3Q11203 375 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 PIN1Q13526 163 aaPredicted RBP16.41■□□□□ 0.22
CLN6-213ENST00000636212 DPPA2Q7Z7J5 298 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 TSPYL5Q86VY4 417 aaPredicted RBP16.41■□□□□ 0.22
CLN6-213ENST00000636212 PRIMA1Q86XR5 153 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 NKAIN4Q8IVV8 208 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 SLC22A24Q8N4F4 322 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 ANKS4BQ8N8V4 417 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 TMEM255BQ8WV15 326 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 NEU4Q8WWR8 484 aaPredicted RBP16.41■□□□□ 0.22
CLN6-213ENST00000636212 RNF121Q9H920 327 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 MEPEQ9NQ76 525 aaPredicted RBP16.41■□□□□ 0.22
CLN6-213ENST00000636212 INIPQ9NRY2 104 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 ARMCX1Q9P291 453 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 CR1P17927 2039 aa16.41■□□□□ 0.22
CLN6-213ENST00000636212 FN1P02751 2386 aaKnown RBP16.4■□□□□ 0.22
CLN6-213ENST00000636212 NAV3Q8IVL0 2385 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 HTR3EA5X5Y0 456 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 DYNC1I1O14576 645 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 GSTA4O15217 222 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 SHOX2O60902 331 aaPredicted RBP16.4■□□□□ 0.22
CLN6-213ENST00000636212 IFNA2P01563 188 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 QDPRP09417 244 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 NR2C1P13056 603 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 ZNF14P17017 642 aaPredicted RBP16.4■□□□□ 0.22
CLN6-213ENST00000636212 NR4A1P22736 598 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 MDH1P40925 334 aaKnown RBP16.4■□□□□ 0.22
CLN6-213ENST00000636212 SELENOWP63302 87 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 LSM11P83369 360 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLN6-213ENST00000636212 RPL18Q07020 188 aaKnown RBP16.4■□□□□ 0.22
CLN6-213ENST00000636212 GGTLC2Q14390 218 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 CYB5R2Q6BCY4 276 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 TMEM53Q6P2H8 277 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 SVOPLQ8N434 492 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 POU5F2Q8N7G0 328 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 PFN4Q8NHR9 129 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 MS4A3Q96HJ5 214 aa16.4■□□□□ 0.22
CLN6-213ENST00000636212 SH3PXD2BA1X283 911 aa16.39■□□□□ 0.21
CLN6-213ENST00000636212 CENPBD1B2RD01 187 aa16.39■□□□□ 0.21
CLN6-213ENST00000636212 NDUFAB1O14561 156 aa16.39■□□□□ 0.21
CLN6-213ENST00000636212 PTHP01270 115 aa16.39■□□□□ 0.21
CLN6-213ENST00000636212 F13BP05160 661 aa16.39■□□□□ 0.21
CLN6-213ENST00000636212 PGA4P0DJD7 388 aa16.39■□□□□ 0.21
CLN6-213ENST00000636212 PGA3P0DJD8 388 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms