RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 TSNAXQ99598 290 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 TRPV4Q9HBA0 871 aa13.48□□□□□ -0.25
CACNA1A-220ENST00000635988 GNB5O14775 395 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 DNAJB6O75190 326 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SNRPNP63162 240 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 GUCA2AQ02747 115 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SCRN3Q0VDG4 424 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 PLA2G7Q13093 441 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 FAM74A1Q5RGS3 127 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF511Q8NB15 262 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 OR51D1Q8NGF3 324 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 OR2G2Q8NGZ5 317 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SLCO5A1Q9H2Y9 848 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF304Q9HCX3 659 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 INSL6Q9Y581 213 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 TRPM6Q9BX84 2022 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 LOC100289279A0A1B0GTE1 492 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 A0A1B0GTI1 187 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM200CA6NKL6 621 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 IMPA2O14732 288 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 RAB3DO95716 219 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 HNRNPA1P09651 372 aaKnown RBP eCLIP13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 POU3F4P49335 361 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 LUMP51884 338 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SNTB1Q13884 538 aaKnown RBP13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 YOD1Q5VVQ6 348 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 C11orf87Q6NUJ2 197 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 RAB11FIP2Q7L804 512 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 GRASPQ7Z6J2 395 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 FGF13Q92913 245 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 GPR174Q9BXC1 333 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SCPEP1Q9HB40 452 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 IKZF2Q9UKS7 526 aa13.47□□□□□ -0.25
CACNA1A-220ENST00000635988 SCN3AQ9NY46 2000 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 SNRNP200O75643 2136 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 BRCA2P51587 3418 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 TTLL8A6PVC2 850 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 HIDE1A8MVS5 230 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 P2RX6O15547 441 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 PPIAP62937 165 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 EGR3Q06889 387 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 RAB11BQ15907 218 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF141Q15928 474 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 SLC39A5Q6ZMH5 540 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 ACOT7LQ6ZUV0 252 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 OR2W3Q7Z3T1 314 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 CDC20BQ86Y33 519 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 ARMC10Q8N2F6 343 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 MRPL43Q8N983 215 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 OR8S1Q8NH09 359 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 MCHR2Q969V1 340 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 CCNL2Q96S94 520 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 VRK1Q99986 396 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF471Q9BX82 626 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 SRMSQ9H3Y6 488 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 ZNF107Q9UII5 783 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 LAMP5Q9UJQ1 280 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 MRPS23Q9Y3D9 190 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 TMEM14AQ9Y6G1 99 aa13.46□□□□□ -0.25
CACNA1A-220ENST00000635988 FAM171A2A8MVW0 826 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 TNFSF14O43557 240 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 GNRH1P01148 92 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 CT62P0C5K7 136 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 CDKN2AP42771 156 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 GRK6P43250 576 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 HTRA4P83105 476 aaPredicted RBP13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 SGCGQ13326 291 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 KIR2DS3Q14952 304 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 GAB4Q2WGN9 574 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 VWA2Q5GFL6 755 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 FCRL6Q6DN72 434 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 PGAP1Q75T13 922 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 STK35Q8TDR2 534 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 FAM3DQ96BQ1 224 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 RSPRY1Q96DX4 576 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 HHIPL1Q96JK4 782 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 LMF2Q9BU23 707 aaKnown RBP13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 KLHDC2Q9Y2U9 406 aa13.46□□□□□ -0.26
CACNA1A-220ENST00000635988 A0A087WV48 116 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 TMEM218A2RU14 115 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 ZNF860A6NHJ4 632 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 SLC17A2O00624 439 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 PHYHO14832 338 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 NARSO43776 548 aaKnown RBP13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 CD14P08571 375 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 EFNB2P52799 333 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 HFEQ30201 348 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 HAGHLQ6PII5 290 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 EXD3Q8N9H8 876 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 OR52R1Q8NGF1 315 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 TOX2Q96NM4 488 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 PDCD10Q9BUL8 212 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 CYR61O00622 381 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 CD34P28906 385 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 AKR1D1P51857 326 aa13.45□□□□□ -0.26
CACNA1A-220ENST00000635988 PSG6Q00889 435 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms